RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 B3GAT2Q9NPZ5 323 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 NPAP1Q9NZP6 1156 aa23.21■■□□□ 1.31
SHOX2-204ENST00000483851 A0A0G2JK05 382 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 KLK10O43240 276 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 CPN1P15169 458 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 RAB3BP20337 219 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 KIR3DL2P43630 455 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 MMP16P51512 607 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 TPTEP56180 551 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 CBX3Q13185 183 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 PYDC2Q56P42 97 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 AGAP6Q5VW22 663 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 EMC3Q9P0I2 261 aa23.2■■□□□ 1.3
SHOX2-204ENST00000483851 GDF2Q9UK05 429 aaPredicted RBP23.2■■□□□ 1.3
SHOX2-204ENST00000483851 TRGV5A0A0B4J1U4 118 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 PLA2G10O15496 165 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 SLC19A2O60779 497 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 CDAP32320 146 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 PHYHD1Q5SRE7 291 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 IGFL3Q6UXB1 125 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 AKAP14Q86UN6 197 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 ZNF878C9JN71 531 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 PDCD5O14737 125 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 SRMP19623 302 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 MRPS34P82930 218 aaKnown RBP23.19■■□□□ 1.3
SHOX2-204ENST00000483851 TAB1Q15750 504 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 C11orf54Q9H0W9 315 aaPredicted RBP23.19■■□□□ 1.3
SHOX2-204ENST00000483851 LDAHQ9H6V9 325 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 EMC7Q9NPA0 242 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 NOX4Q9NPH5 578 aa23.19■■□□□ 1.3
SHOX2-204ENST00000483851 PNPP00491 289 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 NPR2P20594 1047 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 FOXC1Q12948 553 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 P2RY14Q15391 338 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 CARTPTQ16568 116 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 CORO6Q6QEF8 472 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 SNIP1Q8TAD8 396 aaKnown RBP23.18■■□□□ 1.3
SHOX2-204ENST00000483851 CPT1CQ8TCG5 803 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 SLC22A4Q9H015 551 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 CENPMQ9NSP4 180 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 PARPBPQ9NWS1 579 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 SSUH2Q9Y2M2 353 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 CSAG2Q9Y5P2 127 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 CACNA1CQ13936 2221 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 FREM2Q5SZK8 3169 aa23.18■■□□□ 1.3
SHOX2-204ENST00000483851 WNT11O96014 354 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 IGHG3P01860 377 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 ISG15P05161 165 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 SRYQ05066 204 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 SFXN4Q6P4A7 337 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 KLHL24Q6TFL4 600 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 ZNF704Q6ZNC4 412 aaPredicted RBP23.17■■□□□ 1.3
SHOX2-204ENST00000483851 ADAM30Q9UKF2 790 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 PCDHGA9Q9Y5G4 932 aaKnown RBP23.17■■□□□ 1.3
SHOX2-204ENST00000483851 A0A1B0GTH9 108 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 OR6C65A6NJZ3 312 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 NOTOA8MTQ0 251 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 ZNF724A8MTY0 619 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 PIN1P1O15428 100 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 RNPS1Q15287 305 aaKnown RBP23.17■■□□□ 1.3
SHOX2-204ENST00000483851 STK11Q15831 433 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 RNFT1Q5M7Z0 435 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 CHMP1BQ7LBR1 199 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 GPR137CQ8N3F9 429 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 ZADH2Q8N4Q0 377 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 ABHD3Q8WU67 409 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 NABP1Q96AH0 204 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 RBM24Q9BX46 236 aaKnown RBP23.17■■□□□ 1.3
SHOX2-204ENST00000483851 SLITRK2Q9H156 845 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 EXO5Q9H790 373 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 BCO1Q9HAY6 547 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 ASH2LQ9UBL3 628 aa23.17■■□□□ 1.3
SHOX2-204ENST00000483851 TRBV5-7A0A0A0MS05 114 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 TMEM269A0A1B0GVZ9 245 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 ITGB2P05107 769 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 ELK1P19419 428 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 SGCAQ16586 387 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 IDNKQ5T6J7 187 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 FAM27BQ5VT28 67 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 RDH10Q8IZV5 341 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 OR10S1Q8NGN2 331 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 DEFB127Q9H1M4 99 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 MOB1AQ9H8S9 216 aa23.16■■□□□ 1.3
SHOX2-204ENST00000483851 TFECO14948 347 aaPredicted RBP23.15■■□□□ 1.3
SHOX2-204ENST00000483851 ZNF24P17028 368 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 NTF4P34130 210 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 MFGE8Q08431 387 aaPredicted RBP23.15■■□□□ 1.3
SHOX2-204ENST00000483851 CFAP77Q6ZQR2 320 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 Q8N402 240 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 GJC3Q8NFK1 279 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 ZNF416Q9BWM5 594 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 LINC00470Q9BZP3 86 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 G6PC2Q9NQR9 355 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 CYSLTR2Q9NS75 346 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 OR52A1Q9UKL2 312 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 EMC9Q9Y3B6 208 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 LIPGQ9Y5X9 500 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 ACOD1A6NK06 481 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 HIST1H3AP68431 136 aa23.15■■□□□ 1.3
SHOX2-204ENST00000483851 CEP78Q5JTW2 689 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms