RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CCDC32Q9BV29 185 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 LINC00470Q9BZP3 86 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 BCO1Q9HAY6 547 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 B3GAT2Q9NPZ5 323 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ABRACLQ9P1F3 81 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 SPRR3Q9UBC9 169 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ASH2LQ9UBL3 628 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 MCTS1Q9ULC4 181 aaKnown RBP12.39□□□□□ -0.43
CLK3-204ENST00000483723 EMC9Q9Y3B6 208 aa12.39□□□□□ -0.43
CLK3-204ENST00000483723 ISPDA4D126 451 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 KLK10O43240 276 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 HPGDSO60760 199 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 NPR2P20594 1047 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 PTBP1P26599 531 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLK3-204ENST00000483723 STK11Q15831 433 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 ZNF79Q15937 498 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 Q6ZNX1 250 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 LINGO2Q7L985 606 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 LRRTM1Q86UE6 522 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 ELMOD2Q8IZ81 293 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 OR51A4Q8NGJ6 313 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 CHPT1Q8WUD6 406 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 HTRA1Q92743 480 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 ORAI1Q96D31 301 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 DIRAS2Q96HU8 199 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 DDX28Q9NUL7 540 aaKnown RBP12.38□□□□□ -0.43
CLK3-204ENST00000483723 POLR1DQ9Y2S0 133 aa12.38□□□□□ -0.43
CLK3-204ENST00000483723 AK6Q9Y3D8 172 aaKnown RBP12.38□□□□□ -0.43
CLK3-204ENST00000483723 TNRC6AQ8NDV7 1962 aaKnown RBP12.38□□□□□ -0.43
CLK3-204ENST00000483723 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 RER1O15258 196 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 SLC19A2O60779 497 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 CD37P11049 281 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 ATF1P18846 271 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 ACHEP22303 614 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 SOX2P48431 317 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 FOXC1Q12948 553 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 RIN1Q13671 783 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 TMEM244Q5VVB8 128 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 KLHL24Q6TFL4 600 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 SNX29P2Q8IUI4 249 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 LYSMD2Q8IV50 215 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 GPR137CQ8N3F9 429 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 ASB5Q8WWX0 329 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 LDAHQ9H6V9 325 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 PPP1R3EQ9H7J1 279 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 TMEM38BQ9NVV0 291 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 PARPBPQ9NWS1 579 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 EMC3Q9P0I2 261 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 DAPK2Q9UIK4 370 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 TBX1O43435 398 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 TTRP02766 147 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 CST2P09228 141 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 SLC2A2P11168 524 aaPredicted RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 ADRA2CP18825 462 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 PSMA6P60900 246 aaKnown RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 PMP22Q01453 160 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 RNPS1Q15287 305 aaKnown RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 XKRXQ6PP77 449 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 FNDC9Q8TBE3 224 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 TMEM106AQ96A25 262 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 CMTM3Q96MX0 182 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 SLITRK2Q9H156 845 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 GPR35Q9HC97 309 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 TCF7L1Q9HCS4 588 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 NUFIP1Q9UHK0 495 aaKnown RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 ADAM30Q9UKF2 790 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 HHLA2Q9UM44 414 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 NOSIPQ9Y314 301 aaKnown RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 PCDHGA9Q9Y5G4 932 aaKnown RBP12.37□□□□□ -0.43
CLK3-204ENST00000483723 V9GY05 133 aa12.37□□□□□ -0.43
CLK3-204ENST00000483723 DMXL1Q9Y485 3027 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 ZNF407Q9C0G0 2248 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 TRAV8-7A0A075B6U6 113 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 TTLL8A6PVC2 850 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 RPL36A-HNRNPH2H7BZ11 118 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 UBCP0CG48 685 aaKnown RBP12.36□□□□□ -0.43
CLK3-204ENST00000483723 CFPP27918 469 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 PSMD7P51665 324 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 ODF4Q2M2E3 257 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 RGS21Q2M5E4 152 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 NRN1LQ496H8 165 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 CCDC92Q53HC0 331 aaPredicted RBP12.36□□□□□ -0.43
CLK3-204ENST00000483723 ASPHD2Q6ICH7 369 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 CNIH2Q6PI25 160 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 LRRC28Q86X40 367 aaPredicted RBP12.36□□□□□ -0.43
CLK3-204ENST00000483723 ZADH2Q8N4Q0 377 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 GDPD1Q8N9F7 314 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 KCNJ15Q99712 375 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 SH3GL3Q99963 347 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 SCNM1Q9BWG6 230 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 PBOV1Q9GZY1 135 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 MOB1AQ9H8S9 216 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 CYSLTR2Q9NS75 346 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms