RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 C1orf198Q9H425 327 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 ELOVL3Q9HB03 270 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 NDUFB11Q9NX14 153 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 ZNF629Q9UEG4 869 aaPredicted RBP7.21□□□□□ -1.26
USP4-210ENST00000483212 SH3BGRL2Q9UJC5 107 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 GNG8Q9UK08 70 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 FBXL3Q9UKT7 428 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 OSGIN2Q9Y236 505 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 LRP12Q9Y561 859 aa7.21□□□□□ -1.26
USP4-210ENST00000483212 PHF3Q92576 2039 aaKnown RBP7.2□□□□□ -1.26
USP4-210ENST00000483212 POLEQ07864 2286 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 A0A096LPE4 126 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 SMIM31A0A1B0GVY4 71 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 A0A1W2PPZ6 126 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 OR6C6A6NF89 314 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 A8MXE2 369 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 ZNF878C9JN71 531 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 H3BSA7 217 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 CCRL2O00421 344 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 MSTNO14793 375 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 PLPP2O43688 288 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 SYNGR3O43761 229 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 TMCC2O75069 709 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 PNPP00491 289 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 KRT8P05787 483 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 CD1AP06126 327 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 PATE4P0C8F1 98 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 HSMCR30P0CW71 290 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 CRYGSP22914 178 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 ANOS1P23352 680 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 OTX1P32242 354 aaPredicted RBP7.2□□□□□ -1.26
USP4-210ENST00000483212 DCTDP32321 178 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 TTKP33981 857 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 OPRM1P35372 400 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 PSMB10P40306 273 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 GUCA1AP43080 201 aaPredicted RBP7.2□□□□□ -1.26
USP4-210ENST00000483212 TAS2R43P59537 309 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 PSG4Q00888 419 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 MFGE8Q08431 387 aaPredicted RBP7.2□□□□□ -1.26
USP4-210ENST00000483212 SCRN3Q0VDG4 424 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 CDK5R1Q15078 307 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 RAB35Q15286 201 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 TBRG1Q3YBR2 411 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 HIKESHIQ53FT3 197 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 OR7E24Q6IFN5 339 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 KCTD18Q6PI47 426 aaPredicted RBP7.2□□□□□ -1.26
USP4-210ENST00000483212 SLC16A12Q6ZSM3 486 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 SPATC1Q76KD6 591 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 SLC16A14Q7RTX9 510 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 PRSS45Q7RTY3 260 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 KRT77Q7Z794 578 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 ANKRD13BQ86YJ7 626 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 WDR31Q8NA23 367 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 C1orf162Q8NEQ5 155 aaPredicted RBP7.2□□□□□ -1.26
USP4-210ENST00000483212 GJC3Q8NFK1 279 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 IL17RDQ8NFM7 739 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 OR2AJ1Q8NGZ0 328 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 MRPL48Q96GC5 212 aaKnown RBP7.2□□□□□ -1.26
USP4-210ENST00000483212 ZNF75AQ96N20 296 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 FUNDC2Q9BWH2 189 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 CDADC1Q9BWV3 514 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 OR2H1Q9GZK4 316 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 PIGMQ9H3S5 423 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 TRIM36Q9NQ86 728 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 FAM206AQ9NX38 181 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 B3GNT2Q9NY97 397 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 IKZF2Q9UKS7 526 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 POLR1DQ9Y2S0 133 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 ZFYVE26Q68DK2 2539 aa7.2□□□□□ -1.26
USP4-210ENST00000483212 ARPC4-TTLL3A0A0A6YYG9 625 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 TRIM64BA6NI03 449 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 OR4C45A6NMZ5 311 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 SGCEO43556 437 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 RAD51DO75771 328 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 LYZL6O75951 148 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 C1QL1O75973 258 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 GABARAPO95166 117 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 FARS2O95363 451 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 HLA-HP01893 362 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 TACSTD2P09758 323 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 H2BFMP0C1H6 154 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 CD36P16671 472 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 CD53P19397 219 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 KIR3DL2P43630 455 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 MMP16P51512 607 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 RIDAP52758 137 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 GBX2P52951 348 aaPredicted RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 CASP6P55212 293 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 PSMA6P60900 246 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 RPS11P62280 158 aaKnown RBP eCLIP7.19□□□□□ -1.26
USP4-210ENST00000483212 RPS25P62851 125 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 ADORA2A-AS1P86434 159 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 HGFACQ04756 655 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 MRPL28Q13084 256 aaKnown RBP7.19□□□□□ -1.26
USP4-210ENST00000483212 GPR50Q13585 617 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 P2RY6Q15077 328 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 TSC22D1Q15714 1073 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 CTF1Q16619 201 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 CCDC58Q4VC31 144 aa7.19□□□□□ -1.26
USP4-210ENST00000483212 SOWAHCQ53LP3 525 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms