RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PLBD1Q6P4A8 553 aa18■□□□□ 0.47
SEC13-217ENST00000482647 LINC00346Q8IVM7 164 aa18■□□□□ 0.47
SEC13-217ENST00000482647 C4orf45Q96LM5 186 aa18■□□□□ 0.47
SEC13-217ENST00000482647 DOK1Q99704 481 aa18■□□□□ 0.47
SEC13-217ENST00000482647 CIB1Q99828 191 aa18■□□□□ 0.47
SEC13-217ENST00000482647 HCAR1Q9BXC0 346 aa18■□□□□ 0.47
SEC13-217ENST00000482647 PRRG3Q9BZD7 231 aa18■□□□□ 0.47
SEC13-217ENST00000482647 HDHD2Q9H0R4 259 aa18■□□□□ 0.47
SEC13-217ENST00000482647 MED20Q9H944 212 aa18■□□□□ 0.47
SEC13-217ENST00000482647 BARX1Q9HBU1 254 aaPredicted RBP18■□□□□ 0.47
SEC13-217ENST00000482647 ATPIF1Q9UII2 106 aa18■□□□□ 0.47
SEC13-217ENST00000482647 TMEFF2Q9UIK5 374 aaPredicted RBP18■□□□□ 0.47
SEC13-217ENST00000482647 VPS13CQ709C8 3753 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 TMEM129A0AVI4 362 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 ICMTO60725 284 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 IGHV4-39P01824 125 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 WNT5AP41221 380 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 ECH1Q13011 328 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 CPOQ8IVL8 374 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 ZNF101Q8IZC7 436 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 ZNF511Q8NB15 262 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 OR1J1Q8NGS3 322 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 PITX2Q99697 317 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 COQ7Q99807 217 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 MRPL37Q9BZE1 423 aaKnown RBP17.99■□□□□ 0.47
SEC13-217ENST00000482647 OR51V1Q9H2C8 321 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 WDR76Q9H967 626 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 ELOVL3Q9HB03 270 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 DUSP13Q9UII6 198 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 GDF2Q9UK05 429 aaPredicted RBP17.99■□□□□ 0.47
SEC13-217ENST00000482647 FZR1Q9UM11 496 aa17.99■□□□□ 0.47
SEC13-217ENST00000482647 ZNF593O00488 134 aaPredicted RBP17.98■□□□□ 0.47
SEC13-217ENST00000482647 GLCEO94923 617 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 ABHD16AO95870 558 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 GSTT1P30711 240 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 ENTPD1P49961 510 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 MSMPQ1L6U9 139 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 TEX30Q5JUR7 227 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 LINC01590Q5TEZ4 76 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 CFAP77Q6ZQR2 320 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 TGIF2LYQ8IUE0 185 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 KRTAP1-3Q8IUG1 177 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 WFDC11Q8NEX6 87 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 ABHD4Q8TB40 342 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 SYNPRQ8TBG9 265 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 IPCEF1Q8WWN9 437 aaPredicted RBP17.98■□□□□ 0.47
SEC13-217ENST00000482647 DCLRE1CQ96SD1 692 aaKnown RBP17.98■□□□□ 0.47
SEC13-217ENST00000482647 SYT3Q9BQG1 590 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 TBCCD1Q9NVR7 557 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 GRIP1Q9Y3R0 1128 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 ORC6Q9Y5N6 252 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 COMMD3-BMI1R4GMX3 469 aa17.98■□□□□ 0.47
SEC13-217ENST00000482647 ZAR1LA6NP61 321 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 PRODHO43272 600 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 BAG2O95816 211 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 SPARCP09486 303 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 ZNF250P15622 560 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 EPHA2P29317 976 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 PPOXP50336 477 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 PCK2Q16822 640 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 KLHL12Q53G59 568 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 SLX4IPQ5VYV7 408 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 TMEM154Q6P9G4 183 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 LYPD4Q6UWN0 246 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 CXXC5Q7LFL8 322 aaKnown RBP17.97■□□□□ 0.47
SEC13-217ENST00000482647 PQLC1Q8N2U9 271 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 SLC7A6Q92536 515 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 VRK1Q99986 396 aaPredicted RBP17.97■□□□□ 0.47
SEC13-217ENST00000482647 GABARAPL3Q9BY60 117 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 RIBC2Q9H4K1 309 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 DYNLRB1Q9NP97 96 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 HINT3Q9NQE9 182 aaKnown RBP17.97■□□□□ 0.47
SEC13-217ENST00000482647 GPR160Q9UJ42 338 aa17.97■□□□□ 0.47
SEC13-217ENST00000482647 A0A1W2PPW3 197 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 NDUFS7O75251 213 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 NGFP01138 241 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 ALPLP05186 524 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 ERCC1P07992 297 aaPredicted RBP17.96■□□□□ 0.47
SEC13-217ENST00000482647 TUBG1P23258 451 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 ALDH3A2P51648 485 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 EFNA4P52798 201 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 KLF3P57682 345 aaPredicted RBP17.96■□□□□ 0.47
SEC13-217ENST00000482647 ERVS71-1P61550 626 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 MOGQ16653 247 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 ZNF718Q3SXZ3 478 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 LRP11Q86VZ4 500 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 CBR4Q8N4T8 237 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 MAP6Q96JE9 813 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 ATF6BQ99941 703 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 C9orf16Q9BUW7 83 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 RAB1BQ9H0U4 201 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 TUBG2Q9NRH3 451 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 SLCO1C1Q9NYB5 712 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 USE1Q9NZ43 259 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 RTTNQ86VV8 2226 aa17.96■□□□□ 0.47
SEC13-217ENST00000482647 HIVEP1P15822 2718 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 M0R233 179 aa17.95■□□□□ 0.46
SEC13-217ENST00000482647 TLX2O43763 284 aaPredicted RBP17.95■□□□□ 0.46
SEC13-217ENST00000482647 F12P00748 615 aaPredicted RBP17.95■□□□□ 0.46
SEC13-217ENST00000482647 ADRA2AP08913 450 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms