RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 XKRY2A2RUG3 117 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 A6NIZ1 184 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 BLOC1S5-TXNDC5H3BN57 136 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 CTDSPLO15194 276 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 SULT1B1O43704 296 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 ORC5O43913 435 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 HPGDSO60760 199 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 ICOSLGO75144 302 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 UBL3O95164 117 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 OR6A2O95222 327 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 PLGP00747 810 aaPredicted RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 IGHMP01871 453 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 MRPL3P09001 348 aaKnown RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 LYL1P12980 280 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 FOLR1P15328 257 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 EDNRAP25101 427 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 ITPKBP27987 946 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 TACR3P29371 465 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 CD79BP40259 229 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 CASRP41180 1078 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 APOBEC1P41238 236 aaKnown RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 OR1D4P47884 311 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 DUSP3P51452 185 aaPredicted RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 NR0B1P51843 470 aaKnown RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 TPTEP56180 551 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 RAP1BP61224 184 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 BTG1P62324 171 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 RAP1AP62834 184 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 ERVK-25P63136 954 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 SLC3A1Q07837 685 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 RASGEF1BQ0VAM2 473 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 IL24Q13007 206 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 CD226Q15762 336 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 PCGF3Q3KNV8 242 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 NKAIN2Q5VXU1 208 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 TIGD3Q6B0B8 471 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 LEG1Q6P5S2 330 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 DNM1P34Q6PK57 102 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 LRRN1Q6UXK5 716 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 CFAP77Q6ZQR2 320 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 SLC25A45Q8N413 288 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 DEFB119Q8N690 84 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 METTL27Q8N6F8 245 aaPredicted RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 OR6K6Q8NGW6 343 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 GCDHQ92947 438 aaPredicted RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 MIB2Q96AX9 1013 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 CREB3L1Q96BA8 519 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 ZMYND19Q96E35 227 aaPredicted RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 OMA1Q96E52 524 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 PELI1Q96FA3 418 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 ADAD1Q96M93 576 aaKnown RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 NMNAT3Q96T66 252 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 TBX5Q99593 518 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 NUDT9Q9BW91 350 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 OR2B2Q9GZK3 357 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 ACTR6Q9GZN1 396 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 VN1R1Q9GZP7 353 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 WDR76Q9H967 626 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 MARCH7Q9H992 704 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 IL17BQ9UHF5 180 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 GNG8Q9UK08 70 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 NXT1Q9UKK6 140 aaKnown RBP6.89□□□□□ -1.31
SNX13-208ENST00000482558 RARRES3Q9UL19 164 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 FKBP7Q9Y680 259 aa6.89□□□□□ -1.31
SNX13-208ENST00000482558 A0A1B0GVT2 93 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 FAM240BA0A1B0GVZ2 78 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 MEIOCA2RUB1 952 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 OR6C68A6NDL8 312 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 ANKUB1A6NFN9 424 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 LYRM1O43325 122 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 ZNF208O43345 1280 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 FADS1O60427 444 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SDC3O75056 442 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SNAPC5O75971 98 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 AHSA1O95433 338 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 LDOC1O95751 146 aaPredicted RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 BGLAPP02818 100 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SLPIP03973 132 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 CD63P08962 238 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 RAB40ALP0C0E4 278 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 CALCBP10092 127 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 AZGP1P25311 298 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 SHC1P29353 583 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 CRABP1P29762 137 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 EVI2BP34910 448 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 AQP2P41181 271 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 RFX2P48378 723 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 MMP15P51511 669 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 RAG2P55895 527 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 AP3S2P59780 193 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 DCDP81605 110 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 ZNF117Q03924 483 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 CSTF1Q05048 431 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 RPL18Q07020 188 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 ZP4Q12836 540 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 SELENBP1Q13228 472 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 ALKBH1Q13686 389 aaKnown RBP6.88□□□□□ -1.31
SNX13-208ENST00000482558 NNATQ16517 81 aa6.88□□□□□ -1.31
SNX13-208ENST00000482558 UBE2NLQ5JXB2 153 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms