RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 HAVCR2Q8TDQ0 301 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 DUSP23Q9BVJ7 150 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 CHST11Q9NPF2 352 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 ETV7Q9Y603 341 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 PRUNE2Q8WUY3 3088 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 SLC22A23A1A5C7 686 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 OR14I1A6ND48 311 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 E9PQ18 207 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 IGHV3-9P01782 118 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 RAF1P04049 648 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 LCATP04180 440 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 SELENOPP49908 381 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 PRSS12P56730 875 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 EGR4Q05215 589 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 TIGD3Q6B0B8 471 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 NLRC3Q7RTR2 1065 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 ZNF546Q86UE3 836 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 SLC51BQ86UW2 128 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 SPEM1Q8N4L4 309 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 ELP5Q8TE02 316 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 ZNF721Q8TF20 911 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 EDAQ92838 391 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 ZBTB8AQ96BR9 441 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 RTN4RQ9BZR6 473 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 SLC5A6Q9Y289 635 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 NSG1A0A0A6YYJ2 146 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 FAM230AA0A1W2PPH8 454 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 DDAH2O95865 285 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 PMP2P02689 132 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 QDPRP09417 244 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 PI3P19957 117 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 GABRR1P24046 479 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 ZNF93P35789 620 aaPredicted RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 RAP2BP61225 183 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 SLC9A3R2Q15599 337 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 C3orf33Q6P1S2 294 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 CPEB2Q7Z5Q1 589 aaKnown RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 ZNF485Q8NCK3 441 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 STEAP2Q8NFT2 490 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 C11orf40Q8WZ69 217 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 GNRHR2Q96P88 292 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 SORCS2Q96PQ0 1159 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 MNTQ99583 582 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 URM1Q9BTM9 101 aaKnown RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 TINAGL1Q9GZM7 467 aaPredicted RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 ACKR4Q9NPB9 350 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 A0A0C4DFX4 3053 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 TEX51A0A1B0GUA7 166 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 LYPD3O95274 346 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 PI4KAP42356 2102 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 CSNK2A1P68400 391 aaPredicted RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 MFGE8Q08431 387 aaPredicted RBP8.22□□□□□ -1.09
CALD1-220ENST00000482470 Q5BKY6 102 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 TRIM61Q5EBN2 209 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 TMEM71Q6P5X7 295 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 TMEM17Q86X19 198 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 CSNK2A3Q8NEV1 391 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 OR6M1Q8NGM8 313 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 OR1J4Q8NGS1 313 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 KCNJ15Q99712 375 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 POFUT1Q9H488 388 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 LANCL2Q9NS86 450 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 FBXO4Q9UKT5 387 aa8.22□□□□□ -1.09
CALD1-220ENST00000482470 DNAJC13O75165 2243 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 SULT1B1O43704 296 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 P04436 131 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 ERCC1P07992 297 aaPredicted RBP8.21□□□□□ -1.09
CALD1-220ENST00000482470 ABOP16442 354 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 ITGA3P26006 1051 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 GABREP78334 506 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 MYBPHQ13203 477 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 BTN1A1Q13410 526 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 EXOSC2Q13868 293 aaKnown RBP8.21□□□□□ -1.09
CALD1-220ENST00000482470 CHRFAM7AQ494W8 412 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 LINC01590Q5TEZ4 76 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 OR52W1Q6IF63 320 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 MCEMP1Q8IX19 187 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 SLC25A45Q8N413 288 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 ZNF454Q8N9F8 522 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 RNASE11Q8TAA1 199 aaKnown RBP8.21□□□□□ -1.09
CALD1-220ENST00000482470 RHBDD1Q8TEB9 315 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 MAFIPQ8WZ33 124 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 HOXB13Q92826 284 aaPredicted RBP8.21□□□□□ -1.09
CALD1-220ENST00000482470 CCDC74BQ96LY2 380 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 CCNL2Q96S94 520 aaPredicted RBP8.21□□□□□ -1.09
CALD1-220ENST00000482470 SMOC1Q9H4F8 434 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 SCPEP1Q9HB40 452 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 TAS2R5Q9NYW4 299 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 TAS2R3Q9NYW6 316 aa8.21□□□□□ -1.09
CALD1-220ENST00000482470 RBM7Q9Y580 266 aaKnown RBP8.21□□□□□ -1.09
CALD1-220ENST00000482470 TANC1Q9C0D5 1861 aa8.21□□□□□ -1.1
CALD1-220ENST00000482470 TCRBV16S1A1N1A0A5B0 115 aa8.21□□□□□ -1.1
CALD1-220ENST00000482470 PLPP3O14495 311 aa8.21□□□□□ -1.1
CALD1-220ENST00000482470 XRCC3O43542 346 aa8.21□□□□□ -1.1
CALD1-220ENST00000482470 THBS2P35442 1172 aa8.21□□□□□ -1.1
CALD1-220ENST00000482470 APOBEC1P41238 236 aaKnown RBP8.21□□□□□ -1.1
CALD1-220ENST00000482470 ZNF84P51523 738 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms