RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 SYT4Q9H2B2 425 aa10.57□□□□□ -0.72
PTPRF-213ENST00000481019 SIAEQ9HAT2 523 aa10.57□□□□□ -0.72
PTPRF-213ENST00000481019 CHCHD3Q9NX63 227 aaKnown RBP10.57□□□□□ -0.72
PTPRF-213ENST00000481019 VSX1Q9NZR4 365 aaPredicted RBP10.57□□□□□ -0.72
PTPRF-213ENST00000481019 WARS2Q9UGM6 360 aaKnown RBP10.57□□□□□ -0.72
PTPRF-213ENST00000481019 EDARQ9UNE0 448 aa10.57□□□□□ -0.72
PTPRF-213ENST00000481019 MTORP42345 2549 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 TRIM64A6NGJ6 449 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 RGS10O43665 173 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 PRKYO43930 277 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 GPRIN2O60269 458 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 SLC16A7O60669 478 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 WBP4O75554 376 aaKnown RBP10.56□□□□□ -0.72
PTPRF-213ENST00000481019 RAB36O95755 333 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 IGHV4-39P01824 125 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 CRYAAP02489 173 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ZNF32P17041 273 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ATP6V1E1P36543 226 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 MVKQ03426 396 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 RAB40BQ12829 278 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 POU4F2Q12837 409 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ADIPOQQ15848 244 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 SLC35D3Q5M8T2 416 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ZNF362Q5T0B9 420 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-213ENST00000481019 SLC35F1Q5T1Q4 408 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 TMEM154Q6P9G4 183 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 DNM1P34Q6PK57 102 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ZNF773Q6PK81 442 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 LRRC75A-AS1Q8N1F1 130 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 MUC15Q8N387 334 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 STX19Q8N4C7 294 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 OR52E2Q8NGJ4 325 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 OR4K13Q8NH42 304 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 AKR7LQ8NHP1 331 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ZNRF4Q8WWF5 429 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 MRPL48Q96GC5 212 aaKnown RBP10.56□□□□□ -0.72
PTPRF-213ENST00000481019 NMNAT3Q96T66 252 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 COPS4Q9BT78 406 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ZNF416Q9BWM5 594 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 NUAK2Q9H093 628 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 WNT5BQ9H1J7 359 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 DUSP21Q9H596 190 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 RNF121Q9H920 327 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 POLE4Q9NR33 117 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 CA10Q9NS85 328 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 PSORS1C1Q9UIG5 152 aa10.56□□□□□ -0.72
PTPRF-213ENST00000481019 COA3Q9Y2R0 106 aaPredicted RBP10.56□□□□□ -0.72
PTPRF-213ENST00000481019 ARFGEF3Q5TH69 2177 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 IGLV1-36A0A0B4J1U3 117 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 TMEM129A0AVI4 362 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 OR6C68A6NDL8 312 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 FAM171A2A8MVW0 826 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 ENTPD6O75354 484 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 FADS2O95864 444 aaKnown RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 SERPINA5P05154 406 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 APEX1P27695 318 aaKnown RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 DCKP27707 260 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 CRABP1P29762 137 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 HTR1FP30939 366 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 FMO3P31513 532 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 APOBEC3AP31941 199 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 MTNR1AP48039 350 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 SLC25A1P53007 311 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 PSG4Q00888 419 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 NRN1LQ496H8 165 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 PABPC1L2AQ5JQF8 200 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 FAM27BQ5VT28 67 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 AADACL4Q5VUY2 407 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 ZNF544Q6NX49 715 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 LEG1Q6P5S2 330 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 MEPCEQ7L2J0 689 aaKnown RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 TGIF2LYQ8IUE0 185 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 CPOQ8IVL8 374 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 OR6V1Q8N148 313 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 FBXL14Q8N1E6 418 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 CIARTQ8N365 385 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 NPEPL1Q8NDH3 523 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 SDR9C7Q8NEX9 313 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 NUP37Q8NFH4 326 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 OR2T4Q8NH00 348 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 NANOS1Q8WY41 292 aaKnown RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 UBE2FQ969M7 185 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 OTULINQ96BN8 352 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 ZNF582Q96NG8 517 aaPredicted RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 DDOQ99489 341 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 CACNG6Q9BXT2 260 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 RERGLQ9H628 205 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 CBLN4Q9NTU7 201 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 MRPS18AQ9NVS2 196 aaKnown RBP10.55□□□□□ -0.72
PTPRF-213ENST00000481019 HAO2Q9NYQ3 351 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 NDUFA13Q9P0J0 144 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 FZR1Q9UM11 496 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 PCDHGB5Q9Y5G0 923 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 MED13LQ71F56 2210 aa10.55□□□□□ -0.72
PTPRF-213ENST00000481019 LOC100509620A0A075B734 347 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms