RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ERVS71-1P61550 626 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 GNGT1P63211 74 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 TNFAIP6P98066 277 aaPredicted RBP9.75□□□□□ -0.85
CCM2-213ENST00000480658 ALKBH6Q3KRA9 238 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 RFPL4BQ6ZWI9 263 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 MUC20Q8N307 709 aaPredicted RBP9.75□□□□□ -0.85
CCM2-213ENST00000480658 CLDN22Q8N7P3 220 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 OR52J3Q8NH60 311 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 OR1F12Q8NHA8 337 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 PTP4A1Q93096 173 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 YIPF5Q969M3 257 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 SAMD8Q96LT4 415 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 GAL3ST1Q99999 423 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 REPIN1Q9BWE0 567 aaKnown RBP9.75□□□□□ -0.85
CCM2-213ENST00000480658 CDADC1Q9BWV3 514 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 TRIM15Q9C019 465 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 MAGIXQ9H6Y5 334 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 IL19Q9UHD0 177 aa9.75□□□□□ -0.85
CCM2-213ENST00000480658 PPIAL4EA0A075B759 164 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 PPIAL4CA0A0B4J2A2 164 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 LRRC30A6NM36 301 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 PPIAL4DF5H284 164 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 LYNX1G3V0Z9 82 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 H7C1C5 153 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 SOCS2O14508 198 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 SPRY3O43610 288 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 CDC14BO60729 498 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 SEMG1P04279 462 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 PPIAL4FP0DN26 164 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 LYNX1P0DP58 116 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 IL2RGP31785 369 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 BLVRAP53004 296 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 LCN6P62502 163 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 TSPAN31Q12999 210 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 MALLQ13021 153 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 TSTQ16762 297 aaKnown RBP9.74□□□□□ -0.85
CCM2-213ENST00000480658 SPATA46Q5T0L3 261 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 C1orf94Q6P1W5 598 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 DEFB107AQ8IZN7 70 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 KLHL36Q8N4N3 616 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 OR2AJ1Q8NGZ0 328 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 GNPDA2Q8TDQ7 276 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 CCL17Q92583 94 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 ERMAPQ96PL5 475 aaPredicted RBP9.74□□□□□ -0.85
CCM2-213ENST00000480658 CDRT15Q96T59 188 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 FUZQ9BT04 418 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 IFT27Q9BW83 186 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 NUAK2Q9H093 628 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 OR52D1Q9H346 318 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 RERGLQ9H628 205 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 EMC7Q9NPA0 242 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 ACTR3BQ9P1U1 418 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 CD300AQ9UGN4 299 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 KLHL21Q9UJP4 597 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 BAIAP2Q9UQB8 552 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 IER3IP1Q9Y5U9 82 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 MXRA5Q9NR99 2828 aa9.74□□□□□ -0.85
CCM2-213ENST00000480658 FOXH1O75593 365 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 IGHV2-5P01817 119 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 CALB2P22676 271 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 MPV17P39210 176 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 SRP9P49458 86 aaKnown RBP9.73□□□□□ -0.85
CCM2-213ENST00000480658 COX10Q12887 443 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 PSG7Q13046 419 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 CDK5R2Q13319 367 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 TMEM155Q4W5P6 130 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 LEG1Q6P5S2 330 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 FBXW12Q6X9E4 464 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 ZNF620Q6ZNG0 422 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 RINLQ6ZS11 566 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 PIGWQ7Z7B1 504 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 ZBTB46Q86UZ6 589 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 ZDHHC21Q8IVQ6 265 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 C1orf87Q8N0U7 546 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 RNF148Q8N7C7 305 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 OR13G1Q8NGZ3 307 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 OR2T4Q8NH00 348 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 ZNF418Q8TF45 676 aaPredicted RBP9.73□□□□□ -0.85
CCM2-213ENST00000480658 SPTSSAQ969W0 71 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 HAVCR1Q96D42 359 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 ZNF582Q96NG8 517 aaPredicted RBP9.73□□□□□ -0.85
CCM2-213ENST00000480658 HCAR1Q9BXC0 346 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 SLC22A4Q9H015 551 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 OPA3Q9H6K4 179 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 PURGQ9UJV8 347 aaKnown RBP9.73□□□□□ -0.85
CCM2-213ENST00000480658 PRPF19Q9UMS4 504 aaKnown RBP9.73□□□□□ -0.85
CCM2-213ENST00000480658 PCDHB10Q9UN67 800 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 COA3Q9Y2R0 106 aaPredicted RBP9.73□□□□□ -0.85
CCM2-213ENST00000480658 WIPI2Q9Y4P8 454 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 CDH10Q9Y6N8 788 aa9.73□□□□□ -0.85
CCM2-213ENST00000480658 SONP18583 2426 aaKnown RBP9.73□□□□□ -0.85
CCM2-213ENST00000480658 ATRQ13535 2644 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 ISPDA4D126 451 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 ZSCAN5BA6NJL1 495 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 UBOX5O94941 541 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 MPZL1O95297 269 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 FSTL3O95633 263 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 PPP1R3DO95685 299 aa9.72□□□□□ -0.85
CCM2-213ENST00000480658 HLA-DQA2P01906 255 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms