RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 PTCHD4Q6ZW05 846 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 VASH1Q7L8A9 365 aaPredicted RBP13.08□□□□□ -0.32
CDK9-203ENST00000480353 DHFR2Q86XF0 187 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 ARHGAP24Q8N264 748 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 GJC3Q8NFK1 279 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 OR5L1Q8NGL2 311 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 OR2AJ1Q8NGZ0 328 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 OR4K13Q8NH42 304 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 CCL17Q92583 94 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
CDK9-203ENST00000480353 RAB1CQ92928 201 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 RAB39BQ96DA2 213 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 SAMD8Q96LT4 415 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 SOX7Q9BT81 388 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 MUC13Q9H3R2 512 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 LPAR2Q9HBW0 351 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 TUBG2Q9NRH3 451 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 ACTR3BQ9P1U1 418 aa13.08□□□□□ -0.32
CDK9-203ENST00000480353 ISPDA4D126 451 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 MPZL1O95297 269 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 TXNDC12O95881 172 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 FAM107AO95990 144 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 IGHV1-46P01743 117 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 CALB2P22676 271 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 RGS6P49758 472 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 DVL1P1P54792 670 aaPredicted RBP13.07□□□□□ -0.32
CDK9-203ENST00000480353 TSPAN31Q12999 210 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 OTPQ5XKR4 325 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 SHQ1Q6PI26 577 aaKnown RBP13.07□□□□□ -0.32
CDK9-203ENST00000480353 RINLQ6ZS11 566 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 FITM2Q8N6M3 262 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 OR51F2Q8NH61 342 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 OR1F12Q8NHA8 337 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 NMNAT3Q96T66 252 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 GPA33Q99795 319 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 MSL2Q9HCI7 577 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
CDK9-203ENST00000480353 TREM2Q9NZC2 230 aa13.07□□□□□ -0.32
CDK9-203ENST00000480353 OR6C6A6NF89 314 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 DYNC1I1O14576 645 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 RER1O15258 196 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 IDH3BO43837 385 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 CCNB2O95067 398 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 HIST1H1CP16403 213 aaKnown RBP13.06□□□□□ -0.32
CDK9-203ENST00000480353 MMP15P51511 669 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 FXYD6P3P58550 94 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 TNFAIP6P98066 277 aaPredicted RBP13.06□□□□□ -0.32
CDK9-203ENST00000480353 FAM98BQ52LJ0 330 aaKnown RBP13.06□□□□□ -0.32
CDK9-203ENST00000480353 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 POP5Q969H6 163 aaKnown RBP13.06□□□□□ -0.32
CDK9-203ENST00000480353 TSSK2Q96PF2 358 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 DCLRE1CQ96SD1 692 aaKnown RBP13.06□□□□□ -0.32
CDK9-203ENST00000480353 FUZQ9BT04 418 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 HDHD2Q9H0R4 259 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 B9D1Q9UPM9 204 aa13.06□□□□□ -0.32
CDK9-203ENST00000480353 ZSCAN5BA6NJL1 495 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 ARPC3O15145 178 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 SURF4O15260 269 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 PHF1O43189 567 aaPredicted RBP13.05□□□□□ -0.32
CDK9-203ENST00000480353 ICMTO60725 284 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 RP2O75695 350 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 GPANK1O95872 356 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 MSMBP08118 114 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 GAAP10253 952 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 ZNF823P16415 610 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 TNFRSF1AP19438 455 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 ATP6V1B2P21281 511 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDK9-203ENST00000480353 MEP1BQ16820 701 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 SLC35F1Q5T1Q4 408 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 PGBD2Q6P3X8 592 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 ZNF620Q6ZNG0 422 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 SDR9C7Q8NEX9 313 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 OR2Z1Q8NG97 314 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 SLC7A6Q92536 515 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 TMEM186Q96B77 213 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 CMBLQ96DG6 245 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 PITX2Q99697 317 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 GAL3ST1Q99999 423 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 RACGAP1Q9H0H5 632 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 MAGIXQ9H6Y5 334 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 REEP1Q9H902 201 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 TBC1D23Q9NUY8 699 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 HIF1ANQ9NWT6 349 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 ATPIF1Q9UII2 106 aa13.05□□□□□ -0.32
CDK9-203ENST00000480353 PURGQ9UJV8 347 aaKnown RBP13.05□□□□□ -0.32
CDK9-203ENST00000480353 GSSP48637 474 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 PSG7Q13046 419 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 SCGB2A2Q13296 93 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 TRIM25Q14258 630 aaKnown RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 KCNMB1Q16558 191 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 CCDC92Q53HC0 331 aaPredicted RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 ACSM5Q6NUN0 579 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 ZNF771Q7L3S4 317 aaPredicted RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 PROKR2Q8NFJ6 384 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 OR9Q2Q8NGE9 314 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 SPATA3Q8NHX4 192 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms