RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 DBHP09172 617 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 OR2T7P0C7T2 308 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 LIMS3P0CW19 117 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 LIMS4P0CW20 117 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 HSMCR30P0CW71 290 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 ALOX5APP20292 161 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 COX5AP20674 150 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 APEX1P27695 318 aaKnown RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 DCKP27707 260 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 CCKARP32238 428 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 PSMB10P40306 273 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 PRKXP51817 358 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 LSM6P62312 80 aaKnown RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 PSG4Q00888 419 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 AQP6Q13520 282 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 RAB39AQ14964 217 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MED22Q15528 200 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 TAF13Q15543 124 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 NEDD8Q15843 81 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 GSG1Q2KHT4 349 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 SLC36A2Q495M3 483 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 PABPC1L2AQ5JQF8 200 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 KRT77Q7Z794 578 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MDP1Q86V88 176 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 OR10S1Q8NGN2 331 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 OR2T27Q8NH04 317 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 LINC01560Q8TB33 94 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 ST7LQ8TDW4 575 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 IPCEF1Q8WWN9 437 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 ITLN2Q8WWU7 325 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 ASB5Q8WWX0 329 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 SLAMF6Q96DU3 332 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 C4orf36Q96KX1 117 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 NR1H4Q96RI1 486 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 OR51B6Q9H340 312 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 C1orf198Q9H425 327 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MARCH7Q9H992 704 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 FKBP14Q9NWM8 211 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 CNOT2Q9NZN8 540 aaKnown RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 JKAMPQ9P055 326 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 FBXL3Q9UKT7 428 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 DIMT1Q9UNQ2 313 aaKnown RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 SNX5Q9Y5X3 404 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 HIVEP3Q5T1R4 2406 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 OR5H1A6NKK0 313 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MYL12BO14950 172 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 SGCEO43556 437 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 PTHP01270 115 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 LCKP06239 509 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 CST2P09228 141 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 H2BFMP0C1H6 154 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 SLC2A1P11166 492 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 ASCL1P50553 236 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 ZNF83P51522 516 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 IDH3GP51553 393 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 GTF2A1P52655 376 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 SH3BGRP55822 239 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 EMX1Q04741 257 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 TMED1Q13445 227 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 DOC2BQ14184 412 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 TAB1Q15750 504 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 KCNMB1Q16558 191 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 ODF4Q2M2E3 257 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MTFR2Q6P444 385 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 FOXL2NBQ6ZUU3 175 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 NAA40Q86UY6 237 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MYPOPQ86VE0 399 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 WFDC8Q8IUA0 241 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 SPARTQ8N0X7 666 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 YIPF7Q8N8F6 280 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 ZFP41Q8N8Y5 198 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 WDR31Q8NA23 367 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 CPEB3Q8NE35 698 aaKnown RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 GJC3Q8NFK1 279 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 OR5M11Q96RB7 305 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MED18Q9BUE0 208 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MROQ9BYG7 248 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 OR2H1Q9GZK4 316 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 YIPF3Q9GZM5 350 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 WNT5BQ9H1J7 359 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 ELOVL3Q9HB03 270 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 FGF20Q9NP95 211 aaPredicted RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 ACOXLQ9NUZ1 547 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 MRPS18AQ9NVS2 196 aaKnown RBP5.6□□□□□ -1.51
HERC4-210ENST00000480158 ERGIC3Q9Y282 383 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 GRIP1Q9Y3R0 1128 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 TIMM10BQ9Y5J6 103 aa5.6□□□□□ -1.51
HERC4-210ENST00000480158 C5orf49A4QMS7 147 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 E9PI62 339 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 IGHA1P01876 353 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 MMP7P09237 267 aaPredicted RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 PIPP12273 146 aaPredicted RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 PSMB1P20618 241 aaKnown RBP5.59□□□□□ -1.51
HERC4-210ENST00000480158 HTR5AP47898 357 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 SLC6A9P48067 706 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 PCBD1P61457 104 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ACTC1P68032 377 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 ACTA1P68133 377 aa5.59□□□□□ -1.51
HERC4-210ENST00000480158 GALEQ14376 348 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms