RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 OAFQ86UD1 273 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 MEX3DQ86XN8 651 aaKnown RBP12.24□□□□□ -0.45
ATG4B-218ENST00000479554 CLDN22Q8N7P3 220 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 OR13C2Q8NGS9 318 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 ACOT11Q8WXI4 607 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-218ENST00000479554 POM121L2Q96KW2 1035 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 ANKRD60Q9BZ19 345 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 NKIRAS2Q9NYR9 191 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 EIF3KQ9UBQ5 218 aaKnown RBP12.24□□□□□ -0.45
ATG4B-218ENST00000479554 U3KQV3 271 aa12.24□□□□□ -0.45
ATG4B-218ENST00000479554 A0A1W2PPL8 197 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 A6NIZ1 184 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 FFAR1O14842 300 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 TPD52L2O43399 206 aaKnown RBP12.23□□□□□ -0.45
ATG4B-218ENST00000479554 CDC14BO60729 498 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 IGHV3-13P01766 116 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 CST2P09228 141 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 LAP3P28838 519 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 GCH1P30793 250 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 SLC9A3P48764 834 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 SMIM11AP58511 58 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 RAP1BP61224 184 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 RAP1AP62834 184 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 PSG4Q00888 419 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 SRSF2Q01130 221 aaKnown RBP12.23□□□□□ -0.45
ATG4B-218ENST00000479554 TEKQ02763 1124 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 PRKCDQ05655 676 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 SLC36A3Q495N2 470 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 SPATA46Q5T0L3 261 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 FAM27BQ5VT28 67 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 UNQ6126/PRO20091Q6UXV3 157 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF101Q8IZC7 436 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
ATG4B-218ENST00000479554 HS3ST5Q8IZT8 346 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 LRRC75AQ8NAA5 344 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 OR4C15Q8NGM1 316 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 CYGBQ8WWM9 190 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 CNBD2Q96M20 576 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 C19orf24Q9BVV8 132 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 RACGAP1Q9H0H5 632 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 LPAR2Q9HBW0 351 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 PDP1Q9P0J1 537 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-218ENST00000479554 LYVE1Q9Y5Y7 322 aa12.23□□□□□ -0.45
ATG4B-218ENST00000479554 LOC100509620A0A075B734 347 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 A0A087WUU8 490 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 IGHV1-69-2A0A0G2JMI3 117 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 FAM157AC9JC47 383 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 H7C1C5 153 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 WNT9BO14905 357 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 MSMBP08118 114 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 GAAP10253 952 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 MYF6P23409 242 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 WNT5AP41221 380 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 GPR4P46093 362 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 HMGA2P52926 109 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 PCBD1P61457 104 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 LCN6P62502 163 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 ADARB1P78563 741 aaKnown RBP12.22□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF718Q3SXZ3 478 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 LIPNQ5VXI9 398 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 TTC23Q5W5X9 447 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 FOXL2NBQ6ZUU3 175 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 RFPL4BQ6ZWI9 263 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 MBOAT2Q6ZWT7 520 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 RRM2BQ7LG56 351 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 ALDH16A1Q8IZ83 802 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 RFLNBQ8N5W9 214 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 OR51F2Q8NH61 342 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 GIPC3Q8TF64 312 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 IPCEF1Q8WWN9 437 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-218ENST00000479554 GTF3AQ92664 365 aaKnown RBP12.22□□□□□ -0.45
ATG4B-218ENST00000479554 TMEM186Q96B77 213 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 OR2H1Q9GZK4 316 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 NDEL1Q9GZM8 345 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 SAP30LQ9HAJ7 183 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 DECR2Q9NUI1 292 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 HIF1ANQ9NWT6 349 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 TREM2Q9NZC2 230 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 KIF17Q9P2E2 1029 aa12.22□□□□□ -0.45
ATG4B-218ENST00000479554 PLSCR5A0PG75 271 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 GADD45GO95257 159 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 LYNP07948 512 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 ANXA8P13928 327 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 MSR1P21757 451 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 PRKACGP22612 351 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 RPL4P36578 427 aaKnown RBP12.21□□□□□ -0.45
ATG4B-218ENST00000479554 CRYBB2P43320 205 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 LIMS1P48059 325 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 ZNF81P51508 661 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 MVKQ03426 396 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 FHL1Q13642 323 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 TSTQ16762 297 aaKnown RBP12.21□□□□□ -0.45
ATG4B-218ENST00000479554 MICAQ29983 383 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 ZIK1Q3SY52 487 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-218ENST00000479554 FAM209AQ5JX71 171 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 AVPI1Q5T686 147 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 KDM4DQ6B0I6 523 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 FAHD1Q6P587 224 aa12.21□□□□□ -0.45
ATG4B-218ENST00000479554 TMPRSS11FQ6ZWK6 438 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms