RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 MSL2Q9HCI7 577 aa11.18□□□□□ -0.62
ABCF1-206ENST00000479542 MIOXQ9UGB7 285 aa11.18□□□□□ -0.62
ABCF1-206ENST00000479542 PPP1R3CQ9UQK1 317 aa11.18□□□□□ -0.62
ABCF1-206ENST00000479542 A0A1B0GWJ7 208 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 TMEM178BH3BS89 294 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 CCDC22O60826 627 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 CTXN1P60606 82 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 FMODQ06828 376 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 FHL1Q13642 323 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 ZMYND11Q15326 602 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 SLC9A3R2Q15599 337 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 ZNF774Q6NX45 483 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 Q6ZR03 302 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 OR52E2Q8NGJ4 325 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 RP9Q8TA86 221 aaKnown RBP11.17□□□□□ -0.62
ABCF1-206ENST00000479542 DCLRE1CQ96SD1 692 aaKnown RBP11.17□□□□□ -0.62
ABCF1-206ENST00000479542 MS4A7Q9GZW8 240 aaPredicted RBP11.17□□□□□ -0.62
ABCF1-206ENST00000479542 POLE4Q9NR33 117 aa11.17□□□□□ -0.62
ABCF1-206ENST00000479542 KIR2DS1A0A191URI9 304 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 ABHD16AO95870 558 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 COX4I1P13073 169 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 CD80P33681 288 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 RGS6P49758 472 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 LSM6P62312 80 aaKnown RBP11.16□□□□□ -0.62
ABCF1-206ENST00000479542 SELENOWP63302 87 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 PRKCDQ05655 676 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 BTNL3Q6UXE8 466 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 FBXW12Q6X9E4 464 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 OR2Z1Q8NG97 314 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 RAB40AQ8WXH6 277 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 CMBLQ96DG6 245 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 PRRC1Q96M27 445 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 ELAC2Q9BQ52 826 aaKnown RBP11.16□□□□□ -0.62
ABCF1-206ENST00000479542 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 GCM1Q9NP62 436 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 DCAF16Q9NXF7 216 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 OR5V1Q9UGF6 321 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 A4GNTQ9UNA3 340 aa11.16□□□□□ -0.62
ABCF1-206ENST00000479542 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 FAM220BPB1ANY3 271 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 SGCEO43556 437 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 TNFRSF1BP20333 461 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 KDELR2P33947 212 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 RPL15P61313 204 aaKnown RBP11.15□□□□□ -0.62
ABCF1-206ENST00000479542 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-206ENST00000479542 OAFQ86UD1 273 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 MICU2Q8IYU8 434 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 BCL6BQ8N143 479 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-206ENST00000479542 OR2T12Q8NG77 320 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 OR5L1Q8NGL2 311 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 ITLN1Q8WWA0 313 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 ERGIC1Q969X5 290 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 RASD2Q96D21 266 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 PLEKHA8Q96JA3 519 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-206ENST00000479542 CMTM6Q9NX76 183 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 GMPR2Q9P2T1 348 aaKnown RBP11.15□□□□□ -0.62
ABCF1-206ENST00000479542 STARD10Q9Y365 291 aa11.15□□□□□ -0.62
ABCF1-206ENST00000479542 DOCK11Q5JSL3 2073 aa11.15□□□□□ -0.63
ABCF1-206ENST00000479542 IGHV2-70DA0A0C4DH43 119 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 OR6C6A6NF89 314 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 CD14P08571 375 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 IFI30P13284 250 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 MMP16P51512 607 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 SEC61A1P61619 476 aaKnown RBP11.14□□□□□ -0.63
ABCF1-206ENST00000479542 AQP6Q13520 282 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 KCNMB1Q16558 191 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 CYBRD1Q53TN4 286 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 TMPRSS11FQ6ZWK6 438 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 SLC15A3Q8IY34 581 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 OFCC1Q8IZS5 231 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 PARP8Q8N3A8 854 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 CELF2-AS1Q8N7Q2 184 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 OR8G5Q8NG78 346 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 TMIGD2Q96BF3 282 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 OR2V2Q96R30 315 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 ANKRD19PQ9H560 264 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 NOX4Q9NPH5 578 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 AP3M1Q9Y2T2 418 aa11.14□□□□□ -0.63
ABCF1-206ENST00000479542 TEX13CA0A0J9YWL9 993 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 ELOVL7A1L3X0 281 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 DOK2O60496 412 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 SHOX2O60902 331 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-206ENST00000479542 SCG5P05408 212 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 GATA4P43694 442 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 OR1E2P47887 323 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 HTR5AP47898 357 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 SRP9P49458 86 aaKnown RBP11.13□□□□□ -0.63
ABCF1-206ENST00000479542 GYS2P54840 703 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 DEFA6Q01524 100 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 LIPEQ05469 1076 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 TOP3AQ13472 1001 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-206ENST00000479542 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 LRRC23Q53EV4 343 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-206ENST00000479542 C8orf82Q6P1X6 216 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-206ENST00000479542 PGM2L1Q6PCE3 622 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 FAM122BQ7Z309 247 aa11.13□□□□□ -0.63
ABCF1-206ENST00000479542 ARPINQ7Z6K5 226 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms