RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 RFKQ969G6 155 aa12.09□□□□□ -0.47
PCIF1-202ENST00000479348 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
PCIF1-202ENST00000479348 DCLRE1CQ96SD1 692 aaKnown RBP12.09□□□□□ -0.47
PCIF1-202ENST00000479348 COQ7Q99807 217 aa12.09□□□□□ -0.47
PCIF1-202ENST00000479348 ELOVL3Q9HB03 270 aa12.09□□□□□ -0.47
PCIF1-202ENST00000479348 CA10Q9NS85 328 aa12.09□□□□□ -0.47
PCIF1-202ENST00000479348 HAO2Q9NYQ3 351 aa12.09□□□□□ -0.47
PCIF1-202ENST00000479348 ST6GALNAC2Q9UJ37 374 aa12.09□□□□□ -0.47
PCIF1-202ENST00000479348 C5orf49A4QMS7 147 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 M0R129 80 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 DLGAP1O14490 977 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 SPARCP09486 303 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 DANCRP0C864 163 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 TUBG1P23258 451 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 TTKP33981 857 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 GLRXP35754 106 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 FABP6P51161 128 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 NUDT6P53370 316 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 UCP2P55851 309 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 SNTB2Q13425 540 aaKnown RBP12.08□□□□□ -0.48
PCIF1-202ENST00000479348 GGTLC2Q14390 218 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 AGAP6Q5VW22 663 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 MEDAGQ5VYS4 303 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 TTC23Q5W5X9 447 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 LYPD4Q6UWN0 246 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 B3GLCTQ6Y288 498 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 CFAP77Q6ZQR2 320 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 ERI1Q8IV48 349 aaKnown RBP12.08□□□□□ -0.48
PCIF1-202ENST00000479348 LINC00346Q8IVM7 164 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 OR6N2Q8NGY6 317 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 PIGTQ969N2 578 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 BCL2L14Q9BZR8 327 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 YIPF3Q9GZM5 350 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 VCX3BQ9H321 246 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 TUBG2Q9NRH3 451 aa12.08□□□□□ -0.48
PCIF1-202ENST00000479348 WARS2Q9UGM6 360 aaKnown RBP12.08□□□□□ -0.48
PCIF1-202ENST00000479348 FBXO9Q9UK97 447 aaPredicted RBP12.08□□□□□ -0.48
PCIF1-202ENST00000479348 ROS1P08922 2347 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 CCDC182A6NF36 153 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 SNTNA6NMZ2 147 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 H0YJX3 145 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 J3QW42 95 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 CCL2P13500 99 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 CCNOP22674 350 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 DNASE1P24855 282 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 RGS6P49758 472 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 POU4F2Q12837 409 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 OCLNQ16625 522 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 SLC16A9Q7RTY1 509 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 DPY19L4Q7Z388 723 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 DCXRQ7Z4W1 244 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 CDH24Q86UP0 819 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 DHRSXQ8N5I4 330 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 OTOSQ8NHW6 89 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 MBD6Q96DN6 1003 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 MAP6Q96JE9 813 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 COG8Q96MW5 612 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 MNTQ99583 582 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 ATF6BQ99941 703 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 APOL4Q9BPW4 351 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 LIME1Q9H400 295 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 PNRC2Q9NPJ4 139 aaKnown RBP12.07□□□□□ -0.48
PCIF1-202ENST00000479348 DDX28Q9NUL7 540 aaKnown RBP12.07□□□□□ -0.48
PCIF1-202ENST00000479348 TBCCD1Q9NVR7 557 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 CMAHPQ9Y471 501 aa12.07□□□□□ -0.48
PCIF1-202ENST00000479348 RAI1Q7Z5J4 1906 aaPredicted RBP12.06□□□□□ -0.48
PCIF1-202ENST00000479348 DCHS2Q6V1P9 2916 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 H0YAE9 185 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 BMP4P12644 408 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 CD53P19397 219 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 HTR1FP30939 366 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 THBS4P35443 961 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 SERPINF1P36955 418 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 SLC15A1P46059 708 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 EIF2B1Q14232 305 aaKnown RBP12.06□□□□□ -0.48
PCIF1-202ENST00000479348 KRTAP27-1Q3LI81 207 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 TMEM154Q6P9G4 183 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 BCDIN3DQ7Z5W3 292 aaKnown RBP12.06□□□□□ -0.48
PCIF1-202ENST00000479348 MUC15Q8N387 334 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 PAQR4Q8N4S7 273 aaPredicted RBP12.06□□□□□ -0.48
PCIF1-202ENST00000479348 RHOXF1Q8NHV9 184 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 ST7LQ8TDW4 575 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 TMEM171Q8WVE6 324 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 NRGNQ92686 78 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 Q96MT0 163 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 ZNF582Q96NG8 517 aaPredicted RBP12.06□□□□□ -0.48
PCIF1-202ENST00000479348 CCL19Q99731 98 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 CBLN4Q9NTU7 201 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCIF1-202ENST00000479348 RRP15Q9Y3B9 282 aaKnown RBP12.06□□□□□ -0.48
PCIF1-202ENST00000479348 TMEM14AQ9Y6G1 99 aa12.06□□□□□ -0.48
PCIF1-202ENST00000479348 B9A039 149 aa12.05□□□□□ -0.48
PCIF1-202ENST00000479348 ZNF878C9JN71 531 aa12.05□□□□□ -0.48
PCIF1-202ENST00000479348 H3BSA7 217 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms