RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 Q96M85 177 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 GPX7Q96SL4 187 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 TMPRSS13Q9BYE2 586 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 MSL2Q9HCI7 577 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 EMC7Q9NPA0 242 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 SPAG4Q9NPE6 437 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 MED4Q9NPJ6 270 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 TMEM106BQ9NUM4 274 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 IL19Q9UHD0 177 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 PURGQ9UJV8 347 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 SNX13Q9Y5W8 968 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 CACNG2Q9Y698 323 aa12.24□□□□□ -0.45
SMARCE1-209ENST00000478349 NME4O00746 187 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 CDC42EP2O14613 210 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 SLC16A7O60669 478 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 RAC2P15153 192 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 RHCEP18577 417 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 LCN2P80188 198 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 PSG7Q13046 419 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 ARMCX4Q5H9R4 360 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 DPY19L2P2Q6ZN68 376 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 VASH1Q7L8A9 365 aaPredicted RBP12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 FAM122BQ7Z309 247 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 C3orf56Q8N813 242 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 SLC7A13Q8TCU3 470 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 POP5Q969H6 163 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 RASD2Q96D21 266 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 FAM46AQ96IP4 442 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 RSRC1Q96IZ7 334 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 MRI1Q9BV20 369 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 HDHD2Q9H0R4 259 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 SYT4Q9H2B2 425 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 RERGLQ9H628 205 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 ZMAT3Q9HA38 289 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 VSX1Q9NZR4 365 aaPredicted RBP12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 ASH2LQ9UBL3 628 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 OR5V1Q9UGF6 321 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 KLHL21Q9UJP4 597 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 PPP1R3CQ9UQK1 317 aa12.23□□□□□ -0.45
SMARCE1-209ENST00000478349 NBEAL1Q6ZS30 2694 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 PRSS23O95084 383 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 SBK2P0C263 348 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 CTLA4P16410 223 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 COMPP49747 757 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 BTG1P62324 171 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 FHL1Q13642 323 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 ESCO2Q56NI9 601 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 JAZF1Q86VZ6 243 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 ZNF283Q8N7M2 679 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 GJC3Q8NFK1 279 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 OR1F12Q8NHA8 337 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 PTP4A1Q93096 173 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 APOBEC3DQ96AK3 386 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 HAVCR1Q96D42 359 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 GPA33Q99795 319 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 NRIP3Q9NQ35 241 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 DDX28Q9NUL7 540 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 SIGLEC7Q9Y286 467 aa12.22□□□□□ -0.45
SMARCE1-209ENST00000478349 UNC119BA6NIH7 251 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 LRRC30A6NM36 301 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 IGHV2-70P01814 119 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 SELEP16581 610 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 ADRA2CP18825 462 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 CFPP27918 469 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 IFNGR2P38484 337 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 SRP9P49458 86 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 C1orf94Q6P1W5 598 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 ZNF771Q7L3S4 317 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 MCUR1Q96AQ8 359 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 CMBLQ96DG6 245 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 ZNF582Q96NG8 517 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 PATZ1Q9HBE1 687 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 ABCD2Q9UBJ2 740 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 LRCH1Q9Y2L9 728 aa12.21□□□□□ -0.45
SMARCE1-209ENST00000478349 SOCS2O14508 198 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 RENP00797 406 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 PRDX6P30041 224 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC6A6P31641 620 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 MDH1P40925 334 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 CENPAP49450 140 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 PSME3P61289 254 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 KCNMB1Q16558 191 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC36A3Q495N2 470 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 C8orf82Q6P1X6 216 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 SMARCD3Q6STE5 483 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 FBXW12Q6X9E4 464 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 C1orf229Q6ZS94 237 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 ATG16L2Q8NAA4 619 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 SGMS2Q8NHU3 365 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 FANK1Q8TC84 345 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 OR2V2Q96R30 315 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 COQ7Q99807 217 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 SLC6A7Q99884 636 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 HCAR1Q9BXC0 346 aa12.2□□□□□ -0.46
SMARCE1-209ENST00000478349 NSRP1Q9H0G5 558 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms