RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CLIC3O95833 236 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF3P17036 446 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 MYF6P23409 242 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 RAP1BP61224 184 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 RAP1AP62834 184 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 PSG4Q00888 419 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 KRR1Q13601 381 aaKnown RBP15.17■□□□□ 0.02
PTPN7-209ENST00000477554 EFNB3Q15768 340 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 ALKBH6Q3KRA9 238 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 SLC35F1Q5T1Q4 408 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 FOXL2NBQ6ZUU3 175 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 JAZF1Q86VZ6 243 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 OR10H5Q8NGA6 315 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 OR8J1Q8NGP2 316 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 GTF3AQ92664 365 aaKnown RBP15.17■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF416Q9BWM5 594 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 WNT5BQ9H1J7 359 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 TPK1Q9H3S4 243 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 PRSS37A4D1T9 235 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 B9A039 149 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 FARS2O95363 451 aaKnown RBP15.17■□□□□ 0.02
PTPN7-209ENST00000477554 CLPTM1O96005 669 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 HEXAP06865 529 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 GNAO1P09471 354 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 HIST1H1CP16403 213 aaKnown RBP15.17■□□□□ 0.02
PTPN7-209ENST00000477554 WNT5AP41221 380 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 ALDH3B1P43353 468 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 SNRPD2P62316 118 aaKnown RBP15.17■□□□□ 0.02
PTPN7-209ENST00000477554 IL5RAQ01344 420 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 HNRNPA0Q13151 305 aaKnown RBP15.17■□□□□ 0.02
PTPN7-209ENST00000477554 MED21Q13503 144 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 THEM4Q5T1C6 240 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 THAP5Q7Z6K1 395 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 ADCK1Q86TW2 530 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 OR52E2Q8NGJ4 325 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 MRPL24Q96A35 216 aaKnown RBP15.17■□□□□ 0.02
PTPN7-209ENST00000477554 RBP7Q96R05 134 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 SYT4Q9H2B2 425 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 FN3KQ9H479 309 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 RERGLQ9H628 205 aa15.17■□□□□ 0.02
PTPN7-209ENST00000477554 LYNX1G3V0Z9 82 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 ADRA2AP08913 450 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 LYNX1P0DP58 116 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 PAICSP22234 425 aaKnown RBP15.16■□□□□ 0.02
PTPN7-209ENST00000477554 PAX7P23759 505 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 EFNA4P52798 201 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 ISL1P61371 349 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 SNRPGP62308 76 aaKnown RBP15.16■□□□□ 0.02
PTPN7-209ENST00000477554 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.16■□□□□ 0.02
PTPN7-209ENST00000477554 SLC36A2Q495M3 483 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 FAM27BQ5VT28 67 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF774Q6NX45 483 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 TMEM53Q6P2H8 277 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 ENTHD1Q8IYW4 607 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF101Q8IZC7 436 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 TCEANCQ8N8B7 351 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 TMEM163Q8TC26 289 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 CNBD2Q96M20 576 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 SNX18Q96RF0 628 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 POLE4Q9NR33 117 aa15.16■□□□□ 0.02
PTPN7-209ENST00000477554 COA3Q9Y2R0 106 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-209ENST00000477554 TLX2O43763 284 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-209ENST00000477554 AHCYL1O43865 530 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 F12P00748 615 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-209ENST00000477554 RENP00797 406 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 CCNOP22674 350 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 RBMXP38159 391 aaKnown RBP15.15■□□□□ 0.02
PTPN7-209ENST00000477554 EFNB1P98172 346 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 MEP1BQ16820 701 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 NRN1LQ496H8 165 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 ZNF362Q5T0B9 420 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-209ENST00000477554 SPATA46Q5T0L3 261 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 IL17RDQ8NFM7 739 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 OR4K13Q8NH42 304 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 RHOXF1Q8NHV9 184 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 FNDC8Q8TC99 324 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 C10orf105Q8TEF2 133 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 POM121Q96HA1 1249 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 POM121L2Q96KW2 1035 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 OR2H1Q9GZK4 316 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 NUAK2Q9H093 628 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 BARX1Q9HBU1 254 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-209ENST00000477554 MOV10Q9HCE1 1003 aaKnown RBP15.15■□□□□ 0.02
PTPN7-209ENST00000477554 CMAHPQ9Y471 501 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 PMF1-BGLAPU3KQ54 211 aa15.15■□□□□ 0.02
PTPN7-209ENST00000477554 FAM171A2A8MVW0 826 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 PRR23D1E9PI22 279 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-209ENST00000477554 PRKYO43930 277 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 SLC16A7O60669 478 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 PRR23D2P0DMB1 279 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-209ENST00000477554 NR2C1P13056 603 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 GLRXP35754 106 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 HSF2Q03933 536 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 SLC25A30Q5SVS4 291 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 MEDAGQ5VYS4 303 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 LEG1Q6P5S2 330 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 SLC37A3Q8NCC5 494 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 NPEPL1Q8NDH3 523 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 SDR9C7Q8NEX9 313 aa15.14■□□□□ 0.01
PTPN7-209ENST00000477554 ZNRF4Q8WWF5 429 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms