RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PLEKHA6Q9Y2H5 1048 aa11.35□□□□□ -0.59
TOP3A-205ENST00000477508 COMMD3-BMI1R4GMX3 469 aa11.35□□□□□ -0.59
TOP3A-205ENST00000477508 C5orf49A4QMS7 147 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 RER1O15258 196 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 SYNGR3O43761 229 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 TLX2O43763 284 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-205ENST00000477508 PRKYO43930 277 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 ICMTO60725 284 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 CCNOP22674 350 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 TUBG1P23258 451 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 POLR2IP36954 125 aaKnown RBP11.34□□□□□ -0.59
TOP3A-205ENST00000477508 SERPINF1P36955 418 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 UCP2P55851 309 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 CCDC92Q53HC0 331 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-205ENST00000477508 ELFN2Q5R3F8 820 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 NXNL2Q5VZ03 156 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 GID4Q8IVV7 300 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 TCEANCQ8N8B7 351 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 ZNF511Q8NB15 262 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 ZNRF4Q8WWF5 429 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 PITX2Q99697 317 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 SLC29A1Q99808 456 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 HCAR1Q9BXC0 346 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 TUBG2Q9NRH3 451 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 GDF2Q9UK05 429 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-205ENST00000477508 CMAHPQ9Y471 501 aa11.34□□□□□ -0.59
TOP3A-205ENST00000477508 TEX15Q9BXT5 2789 aa11.33□□□□□ -0.59
TOP3A-205ENST00000477508 LOC100509620A0A075B734 347 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 TVP23AA6NH52 213 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 SLC22A31A6NKX4 558 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 B9A039 149 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 J3QW42 95 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF593O00488 134 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-205ENST00000477508 CASQ2O14958 399 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-205ENST00000477508 SPARCP09486 303 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 OR4A8P0C604 315 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 SLC2A5P22732 501 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 THBS4P35443 961 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 EVX1P49640 407 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 NUDT6P53370 316 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 SELENOVP59797 346 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 RPS7P62081 194 aaKnown RBP11.33□□□□□ -0.6
TOP3A-205ENST00000477508 APOFQ13790 326 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 EFNB3Q15768 340 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 DEFB113Q30KQ7 82 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 ZIK1Q3SY52 487 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-205ENST00000477508 KRT80Q6KB66 452 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 VHLLQ6RSH7 139 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 RHOUQ7L0Q8 258 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF771Q7L3S4 317 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-205ENST00000477508 IGFBPL1Q8WX77 278 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 RFKQ969G6 155 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 C4orf45Q96LM5 186 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 COG8Q96MW5 612 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 TEAD3Q99594 435 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 TRAF4Q9BUZ4 470 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-205ENST00000477508 VCXQ9H320 206 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 TOR3AQ9H497 397 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 WDR76Q9H967 626 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 TBCCD1Q9NVR7 557 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 SMPD3Q9NY59 655 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-205ENST00000477508 LAMP3Q9UQV4 416 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 PDZD2O15018 2839 aa11.33□□□□□ -0.6
TOP3A-205ENST00000477508 CCDC168Q8NDH2 2452 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 E9PQ18 207 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 H3BSA7 217 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 MPZL2O60487 215 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 SMPD2O60906 423 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 SOD3P08294 240 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 CCL2P13500 99 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 PAX1P15863 534 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 SLC15A1P46059 708 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 RGS6P49758 472 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 SNRPD2P62316 118 aaKnown RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 SLC34A1Q06495 639 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 TMED1Q13445 227 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 ADIPOQQ15848 244 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 AADACL4Q5VUY2 407 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 OTPQ5XKR4 325 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 RGS7BPQ6MZT1 257 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 ERI1Q8IV48 349 aaKnown RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 LINC00346Q8IVM7 164 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 TIGD4Q8IY51 512 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 LRRC75A-AS1Q8N1F1 130 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 PAQR4Q8N4S7 273 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF555Q8NEP9 628 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 FAM81AQ8TBF8 368 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 SPTSSAQ969W0 71 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 ZMYND19Q96E35 227 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 TRMT61AQ96FX7 289 aaKnown RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 IL4I1Q96RQ9 567 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 ATF6BQ99941 703 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 FOXC2Q99958 501 aa11.32□□□□□ -0.6
TOP3A-205ENST00000477508 DDX28Q9NUL7 540 aaKnown RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 ZNF701Q9NV72 531 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-205ENST00000477508 HAO2Q9NYQ3 351 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms