RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 MT-ND5P03915 603 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 HEXAP06865 529 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 DAOP14920 347 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 PRKACGP22612 351 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 GCH1P30793 250 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 ERFP50548 548 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 SLC25A1P53007 311 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 ERVS71-1P61550 626 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 ECH1Q13011 328 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 NKPD1Q17RQ9 610 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 CCDC92Q53HC0 331 aaPredicted RBP11.51□□□□□ -0.57
ACTN4-205ENST00000477174 MBNL2Q5VZF2 373 aaKnown RBP11.51□□□□□ -0.57
ACTN4-205ENST00000477174 CCDC121Q6ZUS5 278 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 ZNF786Q8N393 782 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 CYB561A3Q8NBI2 242 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 PROKR2Q8NFJ6 384 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 OR4Q3Q8NH05 313 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 ABHD4Q8TB40 342 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 DNAJC9Q8WXX5 260 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 COG8Q96MW5 612 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 DCLRE1CQ96SD1 692 aaKnown RBP11.51□□□□□ -0.57
ACTN4-205ENST00000477174 NMNAT2Q9BZQ4 307 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 HDHD2Q9H0R4 259 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 CMC2Q9NRP2 79 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 MYEF2Q9P2K5 600 aaKnown RBP11.51□□□□□ -0.57
ACTN4-205ENST00000477174 CYB5R1Q9UHQ9 305 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 AP4S1Q9Y587 144 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 TLN2Q9Y4G6 2542 aa11.51□□□□□ -0.57
ACTN4-205ENST00000477174 J3QW42 95 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 EBAG9O00559 213 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 TIPRLO75663 272 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 CIB2O75838 187 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 HMGN1P05114 100 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 OSMP13725 252 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 ZNF823P16415 610 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 GIFP27352 417 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 GGT2P36268 569 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 LIPAP38571 399 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 ALDH3B1P43353 468 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 RGS6P49758 472 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 BLVRAP53004 296 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 PPP1CBP62140 327 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 LOXL1Q08397 574 aaPredicted RBP11.5□□□□□ -0.57
ACTN4-205ENST00000477174 CRMP1Q14194 572 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 ATP6AP1Q15904 470 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 MEP1BQ16820 701 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 PCGF3Q3KNV8 242 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 ELFN2Q5R3F8 820 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 OTPQ5XKR4 325 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 SLC18B1Q6NT16 456 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 SLC27A4Q6P1M0 643 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.5□□□□□ -0.57
ACTN4-205ENST00000477174 HS3ST5Q8IZT8 346 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 ATG16L2Q8NAA4 619 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 OR2AJ1Q8NGZ0 328 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 KLF14Q8TD94 323 aaPredicted RBP11.5□□□□□ -0.57
ACTN4-205ENST00000477174 UBASH3BQ8TF42 649 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 COQ7Q99807 217 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 OR2J1Q9GZK6 312 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 FN3KQ9H479 309 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 HINT3Q9NQE9 182 aaKnown RBP11.5□□□□□ -0.57
ACTN4-205ENST00000477174 MRPL22Q9NWU5 206 aaKnown RBP11.5□□□□□ -0.57
ACTN4-205ENST00000477174 NKIRAS2Q9NYR9 191 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 GRIP1Q9Y3R0 1128 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 NF1P21359 2839 aa11.5□□□□□ -0.57
ACTN4-205ENST00000477174 C17orf100A8MU93 164 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 VWC2LB2RUY7 222 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 NAT2P11245 290 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 FCGR1AP12314 374 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 ZNF3P17036 446 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 USF1P22415 310 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-205ENST00000477174 FASP25445 335 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 POU1F1P28069 291 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 FMO3P31513 532 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 PYCR1P32322 319 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 GRK5P34947 590 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 NR4A2P43354 598 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 MRPS11P82912 194 aaKnown RBP11.49□□□□□ -0.57
ACTN4-205ENST00000477174 CDK5Q00535 292 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 DBPQ10586 325 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-205ENST00000477174 CCNIQ14094 377 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 GINS1Q14691 196 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 MAD2L1BPQ15013 274 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-205ENST00000477174 SPATA46Q5T0L3 261 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 CORO6Q6QEF8 472 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 RFPL4BQ6ZWI9 263 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 HIPK1Q86Z02 1210 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 OR5L1Q8NGL2 311 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 OR5K1Q8NHB7 308 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 SLC25A40Q8TBP6 338 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 SNX33Q8WV41 574 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 PITX2Q99697 317 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 TEX12Q9BXU0 123 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 TPK1Q9H3S4 243 aa11.49□□□□□ -0.57
ACTN4-205ENST00000477174 CYSLTR2Q9NS75 346 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms