RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ASB3Q9Y575 518 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 HTTP42858 3142 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 PDE4DIPQ5VU43 2346 aa2.98□□□□□ -1.93
PTCD3-211ENST00000476215 A0A0C4DFX4 3053 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 BRCA2P51587 3418 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 A0A0B4J2A0 478 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 MPHOSPH10O00566 681 aaKnown RBP2.97□□□□□ -1.93
PTCD3-211ENST00000476215 PPP1R2P9O14990 202 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 AIREO43918 545 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 SERPIND1P05546 499 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 MCF2P10911 925 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 CASP14P31944 242 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 TAGLN2P37802 199 aaKnown RBP2.97□□□□□ -1.93
PTCD3-211ENST00000476215 CRYBB2P43320 205 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 CDKN1BP46527 198 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 TGFBIQ15582 683 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 PRAMEF5Q5TYX0 476 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 PRAMEF6Q5VXH4 476 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 TMEM179Q6ZVK1 233 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 TMEM135Q86UB9 458 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 OR2L3Q8NG85 312 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 OR10G2Q8NGC3 310 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 ZNF606Q8WXB4 792 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 FBXO32Q969P5 355 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 OPTNQ96CV9 577 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 TUBGCP3Q96CW5 907 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 API5Q9BZZ5 524 aaKnown RBP2.97□□□□□ -1.93
PTCD3-211ENST00000476215 SLC40A1Q9NP59 571 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 KLHL28Q9NXS3 571 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 OR12D3Q9UGF7 316 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 SHPKQ9UHJ6 478 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 CTNNA3Q9UI47 895 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 CEP290O15078 2479 aa2.97□□□□□ -1.93
PTCD3-211ENST00000476215 RANBP2P49792 3224 aaKnown RBP2.96□□□□□ -1.94
PTCD3-211ENST00000476215 CCL15-CCL14A0A0B4J2E2 113 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 HIDE1A8MVS5 230 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 CALM1P0DP23 149 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 CALM2P0DP24 149 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 CALM3P0DP25 149 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 ZNF823P16415 610 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 CALRP27797 417 aaKnown RBP2.96□□□□□ -1.94
PTCD3-211ENST00000476215 ADORA1P30542 326 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 SERPINB5P36952 375 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 CYB561P49447 251 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 PLP1P60201 277 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 BST2Q10589 180 aaKnown RBP2.96□□□□□ -1.94
PTCD3-211ENST00000476215 CCL15Q16663 113 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 ZNF493Q6ZR52 646 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 ERO1BQ86YB8 467 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 NECAB1Q8N987 351 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 HSD17B11Q8NBQ5 300 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 SHC3Q92529 594 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 TSNARE1Q96NA8 513 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 RPF2Q9H7B2 306 aaKnown RBP2.96□□□□□ -1.94
PTCD3-211ENST00000476215 NOX3Q9HBY0 568 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 INPP5EQ9NRR6 644 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 KIAA0100Q14667 2235 aaKnown RBP2.96□□□□□ -1.94
PTCD3-211ENST00000476215 COL1A1P02452 1464 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-211ENST00000476215 SZT2Q5T011 3432 aa2.96□□□□□ -1.94
PTCD3-211ENST00000476215 MROH7-TTC4A0A0A0MT08 1334 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 PAPPA2Q9BXP8 1791 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 A0A0U1RQS6 177 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 INS-IGF2F8WCM5 200 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 ENTPD5O75356 428 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 FGGP02679 453 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 CT62P0C5K7 136 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 SLC2A3P11169 496 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 PRPS2P11908 318 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 HNRNPH3P31942 346 aaKnown RBP2.95□□□□□ -1.94
PTCD3-211ENST00000476215 RFX3P48380 749 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 MRPS22P82650 360 aaKnown RBP2.95□□□□□ -1.94
PTCD3-211ENST00000476215 TCP10Q12799 353 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 EIF4EBP1Q13541 118 aaPredicted RBP2.95□□□□□ -1.94
PTCD3-211ENST00000476215 PON3Q15166 354 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 HES5Q5TA89 166 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 FAM71E1Q6IPT2 247 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 CCDC73Q6ZRK6 1079 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 ASCL5Q7RTU5 278 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 STPG2Q8N412 459 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 FAM86B1Q8N7N1 296 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 OR9K2Q8NGE7 335 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 PLPPR1Q8TBJ4 325 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 P2RX4Q99571 388 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 TCHPQ9BT92 498 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 LINC00597Q9H2U6 94 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 METTL7AQ9H8H3 244 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 NECAP2Q9NVZ3 263 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 PSME4Q14997 1843 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 MYH3P11055 1940 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 AKAP11Q9UKA4 1901 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 SSC5DA1L4H1 1573 aa2.95□□□□□ -1.94
PTCD3-211ENST00000476215 GAKO14976 1311 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 TRAV39A0A0B4J263 110 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 IGHV3-66A0A0C4DH42 116 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 F6UB75 175 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 WISP3O95389 354 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-211ENST00000476215 C6orf47O95873 294 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 UQCRFS1P1P0C7P4 283 aa2.94□□□□□ -1.94
PTCD3-211ENST00000476215 TLX1NBP0CAT3 122 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms