RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ZNF620Q6ZNG0 422 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 VASH1Q7L8A9 365 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 ASB9Q96DX5 294 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 MARS2Q96GW9 593 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 TRIM15Q9C019 465 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 RACGAP1Q9H0H5 632 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 C1orf21Q9H246 121 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 SAP30LQ9HAJ7 183 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 TUBG2Q9NRH3 451 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 ZNF275Q9NSD4 429 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 ATPIF1Q9UII2 106 aa9.72□□□□□ -0.85
NUDCD3-206ENST00000475952 ARHGAP32A7KAX9 2087 aa9.71□□□□□ -0.85
NUDCD3-206ENST00000475952 MGAM2Q2M2H8 2515 aa9.71□□□□□ -0.85
NUDCD3-206ENST00000475952 TCRBV5S2A0A599 114 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 J3QW42 95 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 PPIHO43447 177 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 IDH3BO43837 385 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 CCNB2O95067 398 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 TGFAP01135 160 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 GAAP10253 952 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 HIST1H1CP16403 213 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 COL8A2P25067 703 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 MPV17P39210 176 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 CCL8P80075 99 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 CCNIQ14094 377 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 TSTQ16762 297 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 FAM98BQ52LJ0 330 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 RINLQ6ZS11 566 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 LINC01356Q8N9X3 169 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 GJC3Q8NFK1 279 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 OR9Q2Q8NGE9 314 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 OR4K13Q8NH42 304 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 YIPF5Q969M3 257 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 CCDC124Q96CT7 223 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 ELMOD3Q96FG2 381 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 SAMD8Q96LT4 415 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 LRGUKQ96M69 825 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 TSSK2Q96PF2 358 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 DCLRE1CQ96SD1 692 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 NMNAT3Q96T66 252 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 BTBD10Q9BSF8 475 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 C19orf24Q9BVV8 132 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 EGLN1Q9GZT9 426 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 HDHD2Q9H0R4 259 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 REEP1Q9H902 201 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 RPRD1BQ9NQG5 326 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 CDH10Q9Y6N8 788 aa9.71□□□□□ -0.86
NUDCD3-206ENST00000475952 IGLV1-36A0A0B4J1U3 117 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 IGHV1-69-2A0A0G2JMI3 117 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 OR6C6A6NF89 314 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 CLDN25C9JDP6 229 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 DCTN6O00399 190 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 SPRY3O43610 288 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 TIMM8AO60220 97 aaPredicted RBP9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 CDC14BO60729 498 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 RP2O75695 350 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 MPZL1O95297 269 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 NGFP01138 241 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 TFP02787 698 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 PCMT1P22061 227 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 IL2RGP31785 369 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 CRYBB2P43320 205 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 RGS6P49758 472 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 MMP15P51511 669 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 HMGA2P52926 109 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 CDH15P55291 814 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 KCNMB1Q16558 191 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 HFEQ30201 348 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 SLC36A3Q495N2 470 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 CLEC12AQ5QGZ9 265 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 USP51Q70EK9 711 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 SDR9C7Q8NEX9 313 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 OR1F12Q8NHA8 337 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 DIRC2Q96SL1 478 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 COQ7Q99807 217 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 SOX7Q9BT81 388 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 NARFLQ9H6Q4 476 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 EGLN3Q9H6Z9 239 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 SRA1Q9HD15 236 aaKnown RBP9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 TBC1D23Q9NUY8 699 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 ZDHHC8Q9ULC8 765 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 B9D1Q9UPM9 204 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 GRIP1Q9Y3R0 1128 aa9.7□□□□□ -0.86
NUDCD3-206ENST00000475952 ZSCAN5BA6NJL1 495 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 B4DSR2 109 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 RER1O15258 196 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 GPANK1O95872 356 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 IGHV1-46P01743 117 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 HLA-DQA2P01906 255 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 ADH4P08319 380 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 T-ENOLP0DO92 83 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 RAP2AP10114 183 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 SRD5A1P18405 259 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 MS4A2Q01362 244 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 SLC3A1Q07837 685 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 COX10Q12887 443 aa9.69□□□□□ -0.86
NUDCD3-206ENST00000475952 GK3PQ14409 553 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms