RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ZNF138P52744 262 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 CDH6P55285 790 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 PRMT2P55345 433 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 VSX2P58304 361 aaPredicted RBP1.99□□□□□ -2.09
LTN1-204ENST00000475344 SLC25A11Q02978 314 aaKnown RBP1.99□□□□□ -2.09
LTN1-204ENST00000475344 ZNF816Q0VGE8 651 aaPredicted RBP1.99□□□□□ -2.09
LTN1-204ENST00000475344 CDC20Q12834 499 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 PON2Q15165 354 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 OR7A5Q15622 319 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 SLC8B1Q6J4K2 584 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 METAP1DQ6UB28 335 aaPredicted RBP1.99□□□□□ -2.09
LTN1-204ENST00000475344 NTM-AS1Q6ZSK4 140 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 TMEM150AQ86TG1 271 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 NECAP1Q8NC96 275 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 ZNF502Q8TBZ5 544 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 SLC7A13Q8TCU3 470 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 ACMSDQ8TDX5 336 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 MRGPRFQ96AM1 343 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 TGS1Q96RS0 853 aaKnown RBP1.99□□□□□ -2.09
LTN1-204ENST00000475344 RNF5Q99942 180 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 SULT4A1Q9BR01 284 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 DDX19AQ9NUU7 478 aaKnown RBP1.99□□□□□ -2.09
LTN1-204ENST00000475344 NMRK1Q9NWW6 199 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 CTNNA3Q9UI47 895 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 SCN1AP35498 2009 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 ADAMTS13Q76LX8 1427 aa1.99□□□□□ -2.09
LTN1-204ENST00000475344 OR5H8P0DN80 308 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 ZNF250P15622 560 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 LOXL1Q08397 574 aaPredicted RBP1.98□□□□□ -2.09
LTN1-204ENST00000475344 PIGHQ14442 188 aaPredicted RBP1.98□□□□□ -2.09
LTN1-204ENST00000475344 UBE2UQ5VVX9 321 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 CARD17Q5XLA6 110 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 GTPBP8Q8N3Z3 284 aaPredicted RBP1.98□□□□□ -2.09
LTN1-204ENST00000475344 KIFAP3Q92845 792 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 NARS2Q96I59 477 aaKnown RBP1.98□□□□□ -2.09
LTN1-204ENST00000475344 CAMK2N2Q96S95 79 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 OR51M1Q9H341 326 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 TMEM165Q9HC07 324 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 KCNJ16Q9NPI9 418 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 HRASLS2Q9NWW9 162 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 S4R3C0 116 aa1.98□□□□□ -2.09
LTN1-204ENST00000475344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.98□□□□□ -2.09
LTN1-204ENST00000475344 TRBV9A0A0B4J1U6 114 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 AP3B1O00203 1094 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 RNF13O43567 381 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 OR2J3O76001 311 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 YIF1AO95070 293 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 FTH1P02794 183 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 SERPINA5P05154 406 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CT45A6P0DMU7 189 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CT45A5P0DMU8 189 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CT45A7P0DMV0 189 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 EIF2S2P20042 333 aaKnown RBP1.97□□□□□ -2.09
LTN1-204ENST00000475344 DCKP27707 260 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CSNK1EP49674 416 aaKnown RBP1.97□□□□□ -2.09
LTN1-204ENST00000475344 STXBP1P61764 594 aaKnown RBP1.97□□□□□ -2.09
LTN1-204ENST00000475344 ZSCAN26Q16670 478 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 PTPN20Q4JDL3 420 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 ORMDL2Q53FV1 153 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CT45A1Q5HYN5 189 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CCDC183Q5T5S1 534 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 C22orf42Q6IC83 251 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 TTC23LQ6PF05 361 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 FBXW12Q6X9E4 464 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 SLC16A14Q7RTX9 510 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 SCD5Q86SK9 330 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 OR4A4PQ8NGN8 299 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CT45A3Q8NHU0 189 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 C15orf40Q8WUR7 153 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 DUS3LQ96G46 650 aaKnown RBP1.97□□□□□ -2.09
LTN1-204ENST00000475344 CHP1Q99653 195 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 SLC29A1Q99808 456 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 CCDC59Q9P031 241 aaKnown RBP1.97□□□□□ -2.09
LTN1-204ENST00000475344 VANGL2Q9ULK5 521 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 ST3GAL6Q9Y274 331 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 MMACHCQ9Y4U1 282 aa1.97□□□□□ -2.09
LTN1-204ENST00000475344 COL22A1Q8NFW1 1626 aaPredicted RBP1.96□□□□□ -2.1
LTN1-204ENST00000475344 TRAV6A0A075B6T7 132 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 A0A0U1RQV1 116 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 OR6C74A6NCV1 312 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 H7C0C1 242 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 BPY2O14599 106 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 NUPL2O15504 423 aaKnown RBP1.96□□□□□ -2.1
LTN1-204ENST00000475344 CHST1O43916 411 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 ANXA5P08758 320 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 UBTFL6P0CB48 400 aaPredicted RBP1.96□□□□□ -2.1
LTN1-204ENST00000475344 RAB3AP20336 220 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 DTYMKP23919 212 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 ATP5OP48047 213 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 SLC11A1P49279 550 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 UBE2NP61088 152 aaKnown RBP1.96□□□□□ -2.1
LTN1-204ENST00000475344 CDH17Q12864 832 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 SRSF5Q13243 272 aaKnown RBP1.96□□□□□ -2.1
LTN1-204ENST00000475344 RGNQ15493 299 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 TAF9Q16594 264 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 PPM1LQ5SGD2 360 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 AVPI1Q5T686 147 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 METTL21CQ5VZV1 264 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 REEP3Q6NUK4 255 aa1.96□□□□□ -2.1
LTN1-204ENST00000475344 CENPQQ7L2Z9 268 aaPredicted RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms