RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 RBM45Q8IUH3 476 aaKnown RBP10.53□□□□□ -0.72
SKA3-206ENST00000475251 ATG16L2Q8NAA4 619 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 TBC1D15Q8TC07 691 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 SSMEM1Q8WWF3 244 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 PTP4A1Q93096 173 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 DACT3Q96B18 629 aaPredicted RBP10.53□□□□□ -0.72
SKA3-206ENST00000475251 HAVCR1Q96D42 359 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 CMBLQ96DG6 245 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 CHIAQ9BZP6 476 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 MARCH7Q9H992 704 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 TMEM165Q9HC07 324 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 TNFRSF19Q9NS68 423 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 CLN8Q9UBY8 286 aa10.53□□□□□ -0.72
SKA3-206ENST00000475251 SOX21Q9Y651 276 aaPredicted RBP10.53□□□□□ -0.72
SKA3-206ENST00000475251 CMYA5Q8N3K9 4069 aa10.52□□□□□ -0.72
SKA3-206ENST00000475251 A6NIZ1 184 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 LCE2BO14633 110 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 PHYHO14832 338 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 ENSAO43768 121 aaKnown RBP10.52□□□□□ -0.73
SKA3-206ENST00000475251 DOK2O60496 412 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 RAC2P15153 192 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 SELEP16581 610 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 HTR5AP47898 357 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 RAP1BP61224 184 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 RPL27P61353 136 aaKnown RBP10.52□□□□□ -0.73
SKA3-206ENST00000475251 RAP1AP62834 184 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 HNRNPA0Q13151 305 aaKnown RBP10.52□□□□□ -0.73
SKA3-206ENST00000475251 TOP3AQ13472 1001 aaPredicted RBP10.52□□□□□ -0.73
SKA3-206ENST00000475251 ZNF181Q2M3W8 571 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 FBLN7Q53RD9 439 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 RUNDC3AQ59EK9 446 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 ASPHD2Q6ICH7 369 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
SKA3-206ENST00000475251 FITM2Q8N6M3 262 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 OR4D11Q8NGI4 311 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 OR5L1Q8NGL2 311 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 OR13G1Q8NGZ3 307 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 MOSPD2Q8NHP6 518 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 PFN4Q8NHR9 129 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 TMEM239Q8WW34 195 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 RABEP2Q9H5N1 569 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 HIF3AQ9Y2N7 669 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 MED31Q9Y3C7 131 aa10.52□□□□□ -0.73
SKA3-206ENST00000475251 P2RY10O00398 339 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 CLPXO76031 633 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 OR5F1O95221 314 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 LIPFP07098 398 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 MELTFP08582 738 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 THRBP10828 461 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 IRF2P14316 349 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 RGS6P49758 472 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 NPY4RP50391 375 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 FGF12P61328 243 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 RELBQ01201 579 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 ENDOGQ14249 297 aaKnown RBP10.51□□□□□ -0.73
SKA3-206ENST00000475251 ZNF404Q494X3 552 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 AGKQ53H12 422 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 CD276Q5ZPR3 534 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 DLEU7Q6UYE1 221 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 DCDC5Q6ZRR9 648 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 DHDDSQ86SQ9 333 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 TSPYL5Q86VY4 417 aaPredicted RBP10.51□□□□□ -0.73
SKA3-206ENST00000475251 ZNF420Q8TAQ5 688 aaPredicted RBP10.51□□□□□ -0.73
SKA3-206ENST00000475251 TMEM255BQ8WV15 326 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 GATAD2BQ8WXI9 593 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 TAMM41Q96BW9 452 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 MEGF10Q96KG7 1140 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 ZNF582Q96NG8 517 aaPredicted RBP10.51□□□□□ -0.73
SKA3-206ENST00000475251 TMEM246Q9BRR3 403 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 CCDC28BQ9BUN5 200 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 TCF7L1Q9HCS4 588 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 POLE4Q9NR33 117 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 C20orf141Q9NUB4 165 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 ASH2LQ9UBL3 628 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 BAG5Q9UL15 447 aa10.51□□□□□ -0.73
SKA3-206ENST00000475251 TNFRSF13BO14836 293 aaPredicted RBP10.5□□□□□ -0.73
SKA3-206ENST00000475251 SGCEO43556 437 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 ALX3O95076 343 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 CYB5R3P00387 301 aaPredicted RBP10.5□□□□□ -0.73
SKA3-206ENST00000475251 LAPTM4AQ15012 233 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 C2orf68Q2NKX9 166 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 ANKDD1AQ495B1 522 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 NKAIN4Q8IVV8 208 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 PCYOX1LQ8NBM8 494 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 OR8G5Q8NG78 346 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 LINC01006Q8NI28 216 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 RASD2Q96D21 266 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 PCGF1Q9BSM1 259 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 TRIM15Q9C019 465 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 POFUT1Q9H488 388 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 STARD10Q9Y365 291 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 SH3GLB1Q9Y371 365 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 NDUFAF1Q9Y375 327 aa10.5□□□□□ -0.73
SKA3-206ENST00000475251 ANGPT2O15123 496 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 TOX4O94842 621 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 ZNF205O95201 554 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 IFNA8P32881 189 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 RBMXP38159 391 aaKnown RBP10.49□□□□□ -0.73
SKA3-206ENST00000475251 MTPNP58546 118 aa10.49□□□□□ -0.73
SKA3-206ENST00000475251 CTXN1P60606 82 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms