RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ZNF205O95201 554 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 OR5F1O95221 314 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 NPPAP01160 153 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 RPS2P15880 293 aaKnown RBP11.75□□□□□ -0.53
CCDC78-209ENST00000474647 MSR1P21757 451 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 CALB2P22676 271 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 CD80P33681 288 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 OR1E2P47887 323 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 HTR5AP47898 357 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 CRYBA2P53672 197 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 RPL27P61353 136 aaKnown RBP11.75□□□□□ -0.53
CCDC78-209ENST00000474647 LCN6P62502 163 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 PIN1Q13526 163 aaPredicted RBP11.75□□□□□ -0.53
CCDC78-209ENST00000474647 VMACQ2NL98 169 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 C1orf94Q6P1W5 598 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 HACD2Q6Y1H2 254 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 Q6ZR03 302 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 MICU2Q8IYU8 434 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 MUC20Q8N307 709 aaPredicted RBP11.75□□□□□ -0.53
CCDC78-209ENST00000474647 TMIGD2Q96BF3 282 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 MAN2C1Q9NTJ4 1040 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 IL19Q9UHD0 177 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 RIMS3Q9UJD0 308 aa11.75□□□□□ -0.53
CCDC78-209ENST00000474647 NPIPB13A6NJU9 1138 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 C12orf71A8MTZ7 269 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 NPIPB4C9JG80 1138 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 SURF4O15260 269 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 KNG1P01042 644 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 TSPAN19P0C672 248 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 T-ENOLP0DO92 83 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 ERFP50548 548 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 NUDT2P50583 147 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 MMP16P51512 607 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 CTXN1P60606 82 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 GNB2P62879 340 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 SRSF4Q08170 494 aaKnown RBP11.74□□□□□ -0.53
CCDC78-209ENST00000474647 ENDOGQ14249 297 aaKnown RBP11.74□□□□□ -0.53
CCDC78-209ENST00000474647 C17orf107Q6ZR85 190 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 OR5AS1Q8N127 324 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 OR10AD1Q8NGE0 317 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 ZNF420Q8TAQ5 688 aaPredicted RBP11.74□□□□□ -0.53
CCDC78-209ENST00000474647 FNDC8Q8TC99 324 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 CMBLQ96DG6 245 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 NSL1Q96IY1 281 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 EFCAB1Q9HAE3 211 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 GID8Q9NWU2 228 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 BAG5Q9UL15 447 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 HIF3AQ9Y2N7 669 aa11.74□□□□□ -0.53
CCDC78-209ENST00000474647 TRAV27A0A087WT01 109 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 TMEM178BH3BS89 294 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
CCDC78-209ENST00000474647 CYB5R3P00387 301 aaPredicted RBP11.73□□□□□ -0.53
CCDC78-209ENST00000474647 IGF2P01344 180 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 IFI30P13284 250 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 KITLGP21583 273 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 MNAT1P51948 309 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 PAX8Q06710 450 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 SCRN3Q0VDG4 424 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 C8orf82Q6P1X6 216 aaPredicted RBP11.73□□□□□ -0.53
CCDC78-209ENST00000474647 C16orf87Q6PH81 154 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 LRRN1Q6UXK5 716 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 BRD3OSQ6XYD6 125 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 FOXL2NBQ6ZUU3 175 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 CCDC80Q76M96 950 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 ATG16L2Q8NAA4 619 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 LIPHQ8WWY8 451 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 BPIFA2Q96DR5 249 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 POLR2J2Q9GZM3 115 aaKnown RBP11.73□□□□□ -0.53
CCDC78-209ENST00000474647 POLR2J3Q9H1A7 115 aaKnown RBP11.73□□□□□ -0.53
CCDC78-209ENST00000474647 GCM1Q9NP62 436 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 POLE4Q9NR33 117 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 TBCCD1Q9NVR7 557 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 IL20RAQ9UHF4 553 aa11.73□□□□□ -0.53
CCDC78-209ENST00000474647 IGHV2-70DA0A0C4DH43 119 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 A0A0G2JK05 382 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 A6NIZ1 184 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 SGCEO43556 437 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 PLATP00750 562 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 SCG5P05408 212 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 CRYBA1P05813 215 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 WNT2P09544 360 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 RAP1BP61224 184 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 RAP1AP62834 184 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 LRRC23Q53EV4 343 aaPredicted RBP11.72□□□□□ -0.53
CCDC78-209ENST00000474647 FAM205BPQ63HN1 556 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 BRICD5Q6PL45 260 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 C9orf139Q6ZV77 190 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 SYT9Q86SS6 491 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 KLBQ86Z14 1044 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 KIR3DL3Q8N743 410 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 OR8J3Q8NGG0 315 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 OR51A7Q8NH64 312 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 WFDC12Q8WWY7 111 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 SLC7A6Q92536 515 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 UPRTQ96BW1 309 aa11.72□□□□□ -0.53
CCDC78-209ENST00000474647 STARD10Q9Y365 291 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms