RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ZNF442Q9H7R0 627 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 BEX4Q9NWD9 120 aaPredicted RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 IMPAD1Q9NX62 359 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 GDF2Q9UK05 429 aaPredicted RBP10.72□□□□□ -0.69
DDX56-209ENST00000473924 CMAHPQ9Y471 501 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 POLQO75417 2590 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 DSCAMO60469 2012 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 AKAP6Q13023 2319 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 SPG11Q96JI7 2443 aa10.72□□□□□ -0.69
DDX56-209ENST00000473924 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 SYNGR3O43761 229 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 GPRIN2O60269 458 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 ABHD16AO95870 558 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 PCSK6P29122 969 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 GLRXP35754 106 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 UCP2P55851 309 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 HIST1H3AP68431 136 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 HIST2H3PS2Q5TEC6 136 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 LINC01590Q5TEZ4 76 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 LCN1P1Q5VSP4 162 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 LPCAT4Q643R3 524 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 RGS7BPQ6MZT1 257 aaPredicted RBP10.71□□□□□ -0.69
DDX56-209ENST00000473924 CFAP77Q6ZQR2 320 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 HIST2H3AQ71DI3 136 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 SHFQ7M4L6 423 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 DCXRQ7Z4W1 244 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 DTX2Q86UW9 622 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 GALNT4Q8N4A0 578 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 FAM81AQ8TBF8 368 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 MBD6Q96DN6 1003 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 C4orf45Q96LM5 186 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 TRAF4Q9BUZ4 470 aaPredicted RBP10.71□□□□□ -0.69
DDX56-209ENST00000473924 BCL2L14Q9BZR8 327 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 PLK3Q9H4B4 646 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 ELOVL3Q9HB03 270 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 ATPIF1Q9UII2 106 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 GRIP1Q9Y3R0 1128 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 PMF1-BGLAPU3KQ54 211 aa10.71□□□□□ -0.69
DDX56-209ENST00000473924 B9A039 149 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 CD8AP01732 235 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 SLC2A5P22732 501 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 CDKN1AP38936 164 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 WNT5AP41221 380 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 ART1P52961 327 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 SELENOVP59797 346 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 SNRPD2P62316 118 aaKnown RBP10.7□□□□□ -0.7
DDX56-209ENST00000473924 ECH1Q13011 328 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 EIF2B1Q14232 305 aaKnown RBP10.7□□□□□ -0.7
DDX56-209ENST00000473924 TAF13Q15543 124 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 TEX30Q5JUR7 227 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 NXNL2Q5VZ03 156 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 DPY19L4Q7Z388 723 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 BCDIN3DQ7Z5W3 292 aaKnown RBP10.7□□□□□ -0.7
DDX56-209ENST00000473924 GID4Q8IVV7 300 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 ZNF101Q8IZC7 436 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 OR8J1Q8NGP2 316 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 OR1J1Q8NGS3 322 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 ABHD4Q8TB40 342 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 SLC7A6Q92536 515 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 TRMT61AQ96FX7 289 aaKnown RBP10.7□□□□□ -0.7
DDX56-209ENST00000473924 MAP6Q96JE9 813 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 HRASLS5Q96KN8 279 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 TEAD3Q99594 435 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 COQ7Q99807 217 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 ATF6BQ99941 703 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 MARCH7Q9H992 704 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 C8orf4Q9NR00 106 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 CENPMQ9NSP4 180 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 SMPD3Q9NY59 655 aaPredicted RBP10.7□□□□□ -0.7
DDX56-209ENST00000473924 DUSP13Q9UII6 198 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 FZR1Q9UM11 496 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 GMPPBQ9Y5P6 360 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 PDZD2O15018 2839 aa10.7□□□□□ -0.7
DDX56-209ENST00000473924 SLC22A31A6NKX4 558 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 F5H5K5 113 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 SELENOFO60613 162 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 DBHP09172 617 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 PEX2P28328 305 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 NAA10P41227 235 aaPredicted RBP10.69□□□□□ -0.7
DDX56-209ENST00000473924 ERVS71-1P61550 626 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 EFNB1P98172 346 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 EFNB3Q15768 340 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 PCK2Q16822 640 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 MEPCEQ7L2J0 689 aaKnown RBP10.69□□□□□ -0.7
DDX56-209ENST00000473924 TIGD4Q8IY51 512 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 C1orf174Q8IYL3 243 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 PACRGLQ8N7B6 248 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 ZNF555Q8NEP9 628 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 THEM6Q8WUY1 208 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 TRUB1Q8WWH5 349 aaKnown RBP10.69□□□□□ -0.7
DDX56-209ENST00000473924 IGFBPL1Q8WX77 278 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 SPTSSAQ969W0 71 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 MRPL24Q96A35 216 aaKnown RBP10.69□□□□□ -0.7
DDX56-209ENST00000473924 SLAMF6Q96DU3 332 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 PERPQ96FX8 193 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 RDH12Q96NR8 316 aa10.69□□□□□ -0.7
DDX56-209ENST00000473924 DCLRE1CQ96SD1 692 aaKnown RBP10.69□□□□□ -0.7
DDX56-209ENST00000473924 MBOAT4Q96T53 435 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms