RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ANKRD60Q9BZ19 345 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 YIPF3Q9GZM5 350 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NAA50Q9GZZ1 169 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GLIPR2Q9H4G4 154 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 EHD1Q9H4M9 534 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 REEP4Q9H6H4 257 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 KIR3DX1Q9H7L2 352 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 Q9H8V8 135 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GORASP2Q9H8Y8 452 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ANKRA2Q9H9E1 313 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 LIN28AQ9H9Z2 209 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TPT1P8Q9HAU6 139 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DNAJC4Q9NNZ3 241 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 FAM60AQ9NP50 221 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TRPV5Q9NQA5 729 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PHPT1Q9NRX4 125 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DCAF13Q9NV06 445 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MRGBPQ9NV56 204 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 PAK1IP1Q9NWT1 392 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GID8Q9NWU2 228 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 THUMPD1Q9NXG2 353 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SMPD3Q9NY59 655 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 TAS2R16Q9NYV7 291 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 USE1Q9NZ43 259 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 VPS29Q9UBQ0 182 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ATP6V1HQ9UI12 483 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 BTNL2Q9UIR0 455 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CES1P1Q9UKY3 287 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 RAB26Q9ULW5 256 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 MMP17Q9ULZ9 603 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NDRG2Q9UN36 371 aaKnown RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SNX6Q9UNH7 406 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DUSP12Q9UNI6 340 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 AP4S1Q9Y587 144 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 GMEB1Q9Y692 573 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 ITPR2Q14571 2701 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 SETD2Q9BYW2 2564 aaPredicted RBP1.18□□□□□ -2.22
CCDC39-203ENST00000473854 NF1P21359 2839 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH11Q96DT5 4516 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 CREBBPQ92793 2442 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 LYSTQ99698 3801 aa1.18□□□□□ -2.22
CCDC39-203ENST00000473854 DOPEY1Q5JWR5 2465 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH5Q8TE73 4624 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DSPPQ9NZW4 1301 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DNAH17Q9UFH2 4485 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GCN1Q92616 2671 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MALRD1Q5VYJ5 2156 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 UBR5O95071 2799 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ABCA1O95477 2261 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 IGHV3-38A0A0C4DH36 116 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 A0A0J9YVX5 310 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TRBV4-1A0A0J9YWV2 114 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 A0A0J9YY10 115 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SPRR5A0A1B0GTR4 108 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 LOC100130705A0A1B0GUX0 176 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 A0A1W2PPW3 197 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 LRIT2A6NDA9 550 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM64BA6NI03 449 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CLDN24A6NM45 220 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 C17orf51A8MQB3 221 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PDZK1P1A8MUH7 402 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 A8MXE2 369 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 B4DXG7 233 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GPR89AB7ZAQ6 455 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 H0YGG7 62 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 H0YJX3 145 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 H3BMH7 237 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 H3BMQ9 156 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 H3BSA7 217 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SLC1A7O00341 560 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 HMGN4O00479 90 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FFAR1O14842 300 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 BCKDKO14874 412 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PGRMC2O15173 223 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SURF4O15260 269 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CLOCKO15516 846 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ERI3O43414 337 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR1F1O43749 312 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PLOD3O60568 738 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TPST2O60704 377 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SDC3O75056 442 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RDH16O75452 317 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 WBP4O75554 376 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 UGT2B17O75795 530 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 KRT33AO76009 404 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MYO1DO94832 1006 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MFN2O95140 757 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 LYPD3O95274 346 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TNFAIP8O95379 198 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SOX14O95416 240 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 H6PDO95479 791 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 APBB3O95704 486 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CST1P01037 141 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PDGFBP01127 241 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 NPPAP01160 153 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MT-ND2P03891 347 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CLPSP04118 112 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RPN2P04844 631 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FABP3P05413 133 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SERPIND1P05546 499 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms