RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GYPBP06028 91 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 DBHP09172 617 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 CLUP10909 449 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 NAT2P11245 290 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 GGT2P36268 569 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 DSCR9P59020 149 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 SLC18B1Q6NT16 456 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 SHQ1Q6PI26 577 aaKnown RBP16.21■□□□□ 0.19
PTCD3-210ENST00000473829 CLEC9AQ6UXN8 241 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 CCDC121Q6ZUS5 278 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 PROKR2Q8NFJ6 384 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 OR1F12Q8NHA8 337 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 IPCEF1Q8WWN9 437 aaPredicted RBP16.21■□□□□ 0.19
PTCD3-210ENST00000473829 DUS3LQ96G46 650 aaKnown RBP16.21■□□□□ 0.19
PTCD3-210ENST00000473829 HCAR1Q9BXC0 346 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 OR2J1Q9GZK6 312 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 CMC2Q9NRP2 79 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 TAAR3PQ9P1P4 343 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 EIF3KQ9UBQ5 218 aaKnown RBP16.21■□□□□ 0.19
PTCD3-210ENST00000473829 KLHL21Q9UJP4 597 aa16.21■□□□□ 0.19
PTCD3-210ENST00000473829 TVP23AA6NH52 213 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 ABHD16AO95870 558 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 HLA-DQA2P01906 255 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 POU1F1P28069 291 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 GRK5P34947 590 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 RPS27P42677 84 aaKnown RBP16.2■□□□□ 0.18
PTCD3-210ENST00000473829 PPP1CBP62140 327 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 ATP6AP1Q15904 470 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 ACSM5Q6NUN0 579 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 OR2T4Q8NH00 348 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 NEU4Q8WWR8 484 aaPredicted RBP16.2■□□□□ 0.18
PTCD3-210ENST00000473829 MED20Q9H944 212 aa16.2■□□□□ 0.18
PTCD3-210ENST00000473829 CSPG4Q6UVK1 2322 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 TLN2Q9Y4G6 2542 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 NF1P21359 2839 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 FAM183AA6NL82 134 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 IGHV3-13P01766 116 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 HEXAP06865 529 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 CSF3P09919 207 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 OSMP13725 252 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 ANXA8P13928 327 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 SPI1P17947 270 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 PDLIM4P50479 330 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 SLC25A1P53007 311 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 CARTPTQ16568 116 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 NKPD1Q17RQ9 610 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 ELFN2Q5R3F8 820 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 FAHD1Q6P587 224 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 ATG16L2Q8NAA4 619 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 GJC3Q8NFK1 279 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 KLF14Q8TD94 323 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-210ENST00000473829 NRBF2Q96F24 287 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 ZNF556Q9HAH1 456 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 PNRC2Q9NPJ4 139 aaKnown RBP16.19■□□□□ 0.18
PTCD3-210ENST00000473829 CYB5R1Q9UHQ9 305 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 ATPIF1Q9UII2 106 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 GRIP1Q9Y3R0 1128 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 AP4S1Q9Y587 144 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 COMMD3-BMI1R4GMX3 469 aa16.19■□□□□ 0.18
PTCD3-210ENST00000473829 NSD1Q96L73 2696 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-210ENST00000473829 SETD2Q9BYW2 2564 aaPredicted RBP16.19■□□□□ 0.18
PTCD3-210ENST00000473829 RIIAD1A6NNX1 92 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 VWC2LB2RUY7 222 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 LYNX1G3V0Z9 82 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 CIB2O75838 187 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 NCR1O76036 304 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 IFNGP01579 166 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 HPXP02790 462 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 LYNX1P0DP58 116 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 DAOP14920 347 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 ZNF3P17036 446 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 DAPP51397 102 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 GINS1Q14691 196 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 RSPO1Q2MKA7 263 aaPredicted RBP16.18■□□□□ 0.18
PTCD3-210ENST00000473829 ZNF718Q3SXZ3 478 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 MBNL2Q5VZF2 373 aaKnown RBP16.18■□□□□ 0.18
PTCD3-210ENST00000473829 SLC27A4Q6P1M0 643 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 AMIGO2Q86SJ2 522 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 ZNF511Q8NB15 262 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 OR10S1Q8NGN2 331 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 OR5K1Q8NHB7 308 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 LRTOMTQ8WZ04 291 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 MAP6Q96JE9 813 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 COQ7Q99807 217 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 HDHD2Q9H0R4 259 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 MS4A5Q9H3V2 200 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 WDR76Q9H967 626 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 ELOVL3Q9HB03 270 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 TBCCD1Q9NVR7 557 aa16.18■□□□□ 0.18
PTCD3-210ENST00000473829 YLPM1P49750 1951 aaKnown RBP16.18■□□□□ 0.18
PTCD3-210ENST00000473829 ERCC1P07992 297 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-210ENST00000473829 SLC25A16P16260 332 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 MAGEB1P43366 347 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 SELENOVP59797 346 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 CDK5Q00535 292 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 KRTAP27-1Q3LI81 207 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 LINC01590Q5TEZ4 76 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 TMEM236Q5W0B7 351 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 TMEM154Q6P9G4 183 aa16.17■□□□□ 0.18
PTCD3-210ENST00000473829 MYOZ1Q9NP98 299 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms