RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 GJC3Q8NFK1 279 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 KLF14Q8TD94 323 aaPredicted RBP9.87□□□□□ -0.83
CPNE1-222ENST00000473373 IPCEF1Q8WWN9 437 aaPredicted RBP9.87□□□□□ -0.83
CPNE1-222ENST00000473373 OTULINQ96BN8 352 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 COG8Q96MW5 612 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 TSSK2Q96PF2 358 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 GPA33Q99795 319 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 EGLN1Q9GZT9 426 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 C1orf21Q9H246 121 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 CYSLTR2Q9NS75 346 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 TAS2R1Q9NYW7 299 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 CDH10Q9Y6N8 788 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 COL6A5A8TX70 2615 aa9.87□□□□□ -0.83
CPNE1-222ENST00000473373 VWC2LB2RUY7 222 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 H3BN98 237 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 IDH3BO43837 385 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 SOX14O95416 240 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 TXNDC12O95881 172 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 IFNGP01579 166 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 SCG5P05408 212 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 COX5BP10606 129 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 TNFSF4P23510 183 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 LIPAP38571 399 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 MPV17P39210 176 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 WNT5AP41221 380 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 GSSP48637 474 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 CDH15P55291 814 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 FXYD6P3P58550 94 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 KRTAP1-1Q07627 177 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 HFEQ30201 348 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.86□□□□□ -0.835e-14■■■■□ 23.4
CPNE1-222ENST00000473373 CORO6Q6QEF8 472 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 USP51Q70EK9 711 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 VASH1Q7L8A9 365 aaPredicted RBP9.86□□□□□ -0.83
CPNE1-222ENST00000473373 LINC00346Q8IVM7 164 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 OR5L1Q8NGL2 311 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 OR1F12Q8NHA8 337 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 TEX47Q8TBZ9 253 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 TIMD4Q96H15 378 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 PITX2Q99697 317 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 FUZQ9BT04 418 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 TSSK6Q9BXA6 273 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 YY1AP1Q9H869 796 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 ZNF556Q9HAH1 456 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 ZNF275Q9NSD4 429 aaPredicted RBP9.86□□□□□ -0.83
CPNE1-222ENST00000473373 CDC42EP3Q9UKI2 254 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 B9D1Q9UPM9 204 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 SONP18583 2426 aaKnown RBP9.86□□□□□ -0.83
CPNE1-222ENST00000473373 ZANQ9Y493 2812 aa9.86□□□□□ -0.83
CPNE1-222ENST00000473373 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 IGHV1-69-2A0A0G2JMI3 117 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 TCRBV5S2A0A599 114 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 DHRS12A0PJE2 317 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 ISPDA4D126 451 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 OR6C6A6NF89 314 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 CLDN25C9JDP6 229 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 ARPC3O15145 178 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 RER1O15258 196 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 NGFP01138 241 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 GASTP01350 101 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 IGHV3-13P01766 116 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 IGFBP1P08833 259 aaPredicted RBP9.85□□□□□ -0.83
CPNE1-222ENST00000473373 T-ENOLP0DO92 83 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 COL8A2P25067 703 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 GIFP27352 417 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 MS4A2Q01362 244 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 MVKQ03426 396 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 TRAP1Q12931 704 aaKnown RBP9.85□□□□□ -0.83
CPNE1-222ENST00000473373 TAF13Q15543 124 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 TRIP10Q15642 601 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 MICAQ29983 383 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 ELFN2Q5R3F8 820 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 PEG10Q86TG7 708 aaKnown RBP9.85□□□□□ -0.83
CPNE1-222ENST00000473373 CYB561A3Q8NBI2 242 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 OR10G2Q8NGC3 310 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 OR2T4Q8NH00 348 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 GIPC3Q8TF64 312 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 SLC7A6Q92536 515 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 ELMOD3Q96FG2 381 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 MARS2Q96GW9 593 aaKnown RBP9.85□□□□□ -0.83
CPNE1-222ENST00000473373 BTBD10Q9BSF8 475 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 RACGAP1Q9H0H5 632 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 HDHD2Q9H0R4 259 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 PTTG3PQ9NZH4 202 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 KIF17Q9P2E2 1029 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 LPAR3Q9UBY5 353 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 CGGBP1Q9UFW8 167 aaPredicted RBP9.85□□□□□ -0.83
CPNE1-222ENST00000473373 KLHL21Q9UJP4 597 aa9.85□□□□□ -0.83
CPNE1-222ENST00000473373 A0A096LNT2 108 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 RIIAD1A6NNX1 92 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 RNF212BA8MTL3 300 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 F5H5K5 113 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 H3BSA7 217 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 DNAJC8O75937 253 aaPredicted RBP9.84□□□□□ -0.83
CPNE1-222ENST00000473373 NCR1O76036 304 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 ZNF3P17036 446 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 POU1F1P28069 291 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 PYCR1P32322 319 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 MAGEA2P43356 314 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 SLC6A9P48067 706 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms