RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 VANGL2Q9ULK5 521 aa1.96□□□□□ -2.1
CLCC1-208ENST00000473062 ADAMTS13Q76LX8 1427 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 IGKV1D-17A0A075B6S4 117 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 CENPVL3A0A0U1RRI6 287 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 A6NDN8 102 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 SMCO2A6NFE2 343 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 RAD51CO43502 376 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 SLC22A5O76082 557 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 H6PDO95479 791 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 ARG1P05089 322 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 CD3GP09693 182 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 PABPC4LP0CB38 370 aaKnown RBP1.95□□□□□ -2.1
CLCC1-208ENST00000473062 OPRK1P41145 380 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 PRRX1P54821 245 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 EIF3EP60228 445 aaKnown RBP1.95□□□□□ -2.1
CLCC1-208ENST00000473062 CCNA1P78396 465 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 PITPNAQ00169 270 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 KDSRQ06136 332 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 ART3Q13508 389 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 KIR2DS1Q14954 304 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 SPANXN2Q5MJ10 180 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 REEP3Q6NUK4 255 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 METAP1DQ6UB28 335 aaPredicted RBP1.95□□□□□ -2.1
CLCC1-208ENST00000473062 MRPL55Q7Z7F7 128 aaKnown RBP1.95□□□□□ -2.1
CLCC1-208ENST00000473062 LGI3Q8N145 548 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 CBR4Q8N4T8 237 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 OR10G6Q8NH81 332 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 PIFOQ8TCI5 191 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 RTN4IP1Q8WWV3 396 aaPredicted RBP1.95□□□□□ -2.1
CLCC1-208ENST00000473062 PTX4Q96A99 478 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 RSG1Q9BU20 258 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 C20orf24Q9BUV8 137 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 FAM192AQ9GZU8 254 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 SPNS1Q9H2V7 528 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 C12orf10Q9HB07 376 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 LYARQ9NX58 379 aaKnown RBP1.95□□□□□ -2.1
CLCC1-208ENST00000473062 PITPNC1Q9UKF7 332 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 ZNF835Q9Y2P0 537 aa1.95□□□□□ -2.1
CLCC1-208ENST00000473062 TRBV9A0A0B4J1U6 114 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 A0A0U1RQV1 116 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 ZNF850A8MQ14 1090 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 SPECC1L-ADORA2AF8WAN1 911 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 SGK1O00141 431 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 EIF4E2O60573 245 aaKnown RBP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 RDH16O75452 317 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 FOXH1O75593 365 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 MPZL1O95297 269 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 IGKV1-17P01599 117 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 CD74P04233 296 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 LINC00869P0C866 280 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 MYL2P10916 166 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 GGT1P19440 569 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 U2AF2P26368 475 aaKnown RBP eCLIP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 HMOX2P30519 316 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 CXCL12P48061 93 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 PRMT2P55345 433 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 C21orf59P57076 290 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 SP4Q02446 784 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 ZNF816Q0VGE8 651 aaPredicted RBP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 LY6EQ16553 131 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 XKR4Q5GH76 650 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 DNLZQ5SXM8 178 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 ZNF684Q5T5D7 378 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 SPECC1LQ69YQ0 1117 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 PLET1Q6UQ28 207 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 FBXW12Q6X9E4 464 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 MBOAT1Q6ZNC8 495 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 NTM-AS1Q6ZSK4 140 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 SSX9Q7RTT3 188 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 COX18Q8N8Q8 333 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 TTC29Q8NA56 475 aaPredicted RBP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 OR6Q1Q8NGQ2 317 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 OR5B3Q8NH48 314 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 LINC01560Q8TB33 94 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 FAM81AQ8TBF8 368 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 ACMSDQ8TDX5 336 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 RNF139Q8WU17 664 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 APH1BQ8WW43 257 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 FLYWCH2Q96CP2 140 aaKnown RBP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 ZNF2Q9BSG1 426 aaPredicted RBP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 NEK6Q9HC98 313 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 EXOSC4Q9NPD3 245 aaKnown RBP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 MED4Q9NPJ6 270 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 MTCH1Q9NZJ7 389 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 CTNNA3Q9UI47 895 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 ST3GAL6Q9Y274 331 aa1.94□□□□□ -2.1
CLCC1-208ENST00000473062 TET2Q6N021 2002 aaPredicted RBP1.94□□□□□ -2.1
CLCC1-208ENST00000473062 CTAGE15A4D2H0 777 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 PDZK1P1A8MUH7 402 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 AP3B1O00203 1094 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 SCAMP2O15127 329 aaKnown RBP1.93□□□□□ -2.1
CLCC1-208ENST00000473062 HUS1O60921 280 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 CCNE2O96020 404 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 SERPINE2P07093 398 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 IRX3P78415 501 aaPredicted RBP1.93□□□□□ -2.1
CLCC1-208ENST00000473062 TRAM2Q15035 370 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 RCN1Q15293 331 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 CCDC183Q5T5S1 534 aa1.93□□□□□ -2.1
CLCC1-208ENST00000473062 TPTE2P1Q5T6R2 138 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms