RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
TPM3-216ENST00000473036 LRP11Q86VZ4 500 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 PRIMA1Q86XR5 153 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 MUC15Q8N387 334 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 SLC7A6Q92536 515 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 PTP4A1Q93096 173 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 MDFIQ99750 246 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 MOV10Q9HCE1 1003 aaKnown RBP11.3□□□□□ -0.6
TPM3-216ENST00000473036 CMC2Q9NRP2 79 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 IMPAD1Q9NX62 359 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 ASH2LQ9UBL3 628 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 KLHL21Q9UJP4 597 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 GMPPBQ9Y5P6 360 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 FKBP7Q9Y680 259 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 TLN2Q9Y4G6 2542 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 ZAR1LA6NP61 321 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 RER1O15258 196 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 SNAP29O95721 258 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 LY6G6DO95868 133 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 RENP00797 406 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 OR4A8P0C604 315 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 PAICSP22234 425 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 CRABP1P29762 137 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 APOBEC3AP31941 199 aaPredicted RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 POLR2IP36954 125 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 RPS27P42677 84 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 PTH2RP49190 550 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 CENPAP49450 140 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 ERVS71-1P61550 626 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 LSM6P62312 80 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 CSNK2BP67870 215 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 SNTB2Q13425 540 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 HIST2H3PS2Q5TEC6 136 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 ZNF544Q6NX49 715 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 CORO6Q6QEF8 472 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 HIST2H3AQ71DI3 136 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 DPPA2Q7Z7J5 298 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 SYT9Q86SS6 491 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 ZNF101Q8IZC7 436 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 IL17RDQ8NFM7 739 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 OR4F15Q8NGB8 312 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 TFAP2CQ92754 450 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 PERPQ96FX8 193 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 Q96MT0 163 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 ADI1Q9BV57 179 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 MYEF2Q9P2K5 600 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 GDF2Q9UK05 429 aaPredicted RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 NDRG4Q9ULP0 352 aaKnown RBP11.29□□□□□ -0.6
TPM3-216ENST00000473036 TIMM10BQ9Y5J6 103 aa11.29□□□□□ -0.6
TPM3-216ENST00000473036 FBN1P35555 2871 aaKnown RBP11.28□□□□□ -0.6
TPM3-216ENST00000473036 TVP23AA6NH52 213 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 RIIAD1A6NNX1 92 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 M0R129 80 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 SURF4O15260 269 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 SYNGR3O43761 229 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 SMPD2O60906 423 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 FAM157BP0CG42 384 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 SPI1P17947 270 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 ANOS1P23352 680 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 STOMP27105 288 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 SLC25A1P53007 311 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 AQP4P55087 323 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 TEKQ02763 1124 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 HSF2Q03933 536 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 ZIK1Q3SY52 487 aaPredicted RBP11.28□□□□□ -0.6
TPM3-216ENST00000473036 SLX4IPQ5VYV7 408 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 SLC18B1Q6NT16 456 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 CFAP77Q6ZQR2 320 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 C8orf59Q8N0T1 100 aaPredicted RBP11.28□□□□□ -0.6
TPM3-216ENST00000473036 ZNF511Q8NB15 262 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 OR8J1Q8NGP2 316 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 PITX2Q99697 317 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 GSX2Q9BZM3 304 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 OR51B6Q9H340 312 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 POFUT1Q9H488 388 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 ZNF442Q9H7R0 627 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 WDR76Q9H967 626 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 CCNB1IP1Q9NPC3 277 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 PNRC2Q9NPJ4 139 aaKnown RBP11.28□□□□□ -0.6
TPM3-216ENST00000473036 HINT3Q9NQE9 182 aaKnown RBP11.28□□□□□ -0.6
TPM3-216ENST00000473036 CBLN4Q9NTU7 201 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 CYB5R1Q9UHQ9 305 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 FZR1Q9UM11 496 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 LRRC42Q9Y546 428 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 CUBNO60494 3623 aa11.28□□□□□ -0.6
TPM3-216ENST00000473036 C5orf49A4QMS7 147 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 OR6C6A6NF89 314 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 C12orf71A8MTZ7 269 aa11.27□□□□□ -0.61
TPM3-216ENST00000473036 KIAA1324LA8MWY0 1029 aaPredicted RBP11.27□□□□□ -0.61
TPM3-216ENST00000473036 E9PQ18 207 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms