RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 A0A087WV48 116 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 TRBV5-7A0A0A0MS05 114 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 A0A1B0GTH9 108 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 TMEM269A0A1B0GVZ9 245 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 ANKRD61A6NGH8 418 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 ACOD1A6NK06 481 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 K7EM74 188 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 TAF4O00268 1085 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 RER1O15258 196 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 CRYABP02511 175 aaKnown RBP8.26□□□□□ -1.09
VPS52-216ENST00000471309 RAF1P04049 648 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 ISG15P05161 165 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 ADRB1P08588 477 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 CST2P09228 141 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 UBCP0CG48 685 aaKnown RBP8.26□□□□□ -1.09
VPS52-216ENST00000471309 BMP4P12644 408 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 ACHEP22303 614 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 CTSSP25774 331 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 HSD11B1P28845 292 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 AGTR1P30556 359 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 GRB2P62993 217 aaKnown RBP8.26□□□□□ -1.09
VPS52-216ENST00000471309 TBR1Q16650 682 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 CEACAM16Q2WEN9 425 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 FAM27D1Q5T7N8 215 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 BCL2L15Q5TBC7 163 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 TSPO2Q5TGU0 170 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 GJC3Q8NFK1 279 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 SNRNP27Q8WVK2 155 aaKnown RBP8.26□□□□□ -1.09
VPS52-216ENST00000471309 HTRA1Q92743 480 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 BORCS5Q969J3 196 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 APH1AQ96BI3 265 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 ZNF837Q96EG3 531 aaPredicted RBP8.26□□□□□ -1.09
VPS52-216ENST00000471309 GMPPAQ96IJ6 420 aaPredicted RBP8.26□□□□□ -1.09
VPS52-216ENST00000471309 FOXB1Q99853 325 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 KCNS3Q9BQ31 491 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 WACQ9BTA9 647 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 HDHD2Q9H0R4 259 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 CALHM2Q9HA72 323 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 PLGRKTQ9HBL7 147 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 PALMDQ9NP74 551 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 G6PC2Q9NQR9 355 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 NUFIP1Q9UHK0 495 aaKnown RBP8.26□□□□□ -1.09
VPS52-216ENST00000471309 OR52A1Q9UKL2 312 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 GTF2A1LQ9UNN4 478 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 SLC22A13Q9Y226 551 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 EMC9Q9Y3B6 208 aa8.26□□□□□ -1.09
VPS52-216ENST00000471309 ACACBO00763 2458 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 A0A0G2JK05 382 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 ZNF587BE7ETH6 402 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 PDCD5O14737 125 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 PIN1P1O15428 100 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 SS18L1O75177 396 aaPredicted RBP8.25□□□□□ -1.09
VPS52-216ENST00000471309 TMEM127O75204 238 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 KRT33AO76009 404 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 NCR1O76036 304 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 TGM6O95932 706 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 OCM2P0CE71 109 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 B4GALT1P15291 398 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 RAB3BP20337 219 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 ETV6P41212 452 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 SCRN3Q0VDG4 424 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 RAB35Q15286 201 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 TAF13Q15543 124 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 ELFN2Q5R3F8 820 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 SFXN4Q6P4A7 337 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 PLXDC2Q6UX71 529 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 ZNF704Q6ZNC4 412 aaPredicted RBP8.25□□□□□ -1.09
VPS52-216ENST00000471309 ZNF627Q7L945 461 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 P4HA3Q7Z4N8 544 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 SYT9Q86SS6 491 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 NR2C2APQ86WQ0 139 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 ELMOD2Q8IZ81 293 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 SLC22A24Q8N4F4 322 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 TSEN15Q8WW01 171 aaKnown RBP8.25□□□□□ -1.09
VPS52-216ENST00000471309 ACOT12Q8WYK0 555 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
VPS52-216ENST00000471309 ABHD17AQ96GS6 310 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 CNTNAP3BQ96NU0 1288 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 WDFY2Q96P53 400 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 KCNJ15Q99712 375 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 ATF6BQ99941 703 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 CNTNAP3Q9BZ76 1288 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 NOX4Q9NPH5 578 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 SLC7A10Q9NS82 523 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 CLEC4AQ9UMR7 237 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 TP53TG5Q9Y2B4 290 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 SPTBN2O15020 2390 aa8.25□□□□□ -1.09
VPS52-216ENST00000471309 LOC107986453A0A1B0GWG9 222 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 SMIM30A4D0T7 59 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 FARS2O95363 451 aaKnown RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 APOC1P02654 83 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 TTRP02766 147 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 SRMP19623 302 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 FSTP19883 344 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 OTX1P32242 354 aaPredicted RBP8.24□□□□□ -1.09
VPS52-216ENST00000471309 SOX2P48431 317 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 CAV3P56539 151 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 PCBD1P61457 104 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 ZNF45Q02386 682 aa8.24□□□□□ -1.09
VPS52-216ENST00000471309 ECH1Q13011 328 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms