RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 HBEGFQ99075 208 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF416Q9BWM5 594 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 NMUR2Q9GZQ4 415 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 OR51B5Q9H339 312 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF385DQ9H6B1 395 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 TMEM231Q9H6L2 316 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 FAM60AQ9NP50 221 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 CUTCQ9NTM9 273 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 AIG1Q9NVV5 245 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 TEKT2Q9UIF3 430 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SLC22A7Q9Y694 548 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 SCN3AQ9NY46 2000 aa4.02□□□□□ -1.77
CCDC39-202ENST00000471307 A0A1B0GWJ7 208 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 FAM230AA0A1W2PPH8 454 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 D6RAR5 112 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 F8WDY8 70 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 SAP18O00422 153 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 PLPP1O14494 284 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 RTL8CO15255 209 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ERI3O43414 337 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 OR2B3O76000 313 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 KIAA0754O94854 1291 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 SCELO95171 688 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 NPPAP01160 153 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 IL6P05231 212 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 KRT8P05787 483 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 KLK1P06870 262 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 COX4I1P13073 169 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 SDC1P18827 310 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 CSRP1P21291 193 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 HIST1H1TP22492 207 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 CALB2P22676 271 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ATP5A1P25705 553 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 SSR2P43308 183 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 GABRA4P48169 554 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 PITPNBP48739 271 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 CNN1P51911 297 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 POLR2JP52435 117 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 PLA2G16P53816 162 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 VSX2P58304 361 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 RPL38P63173 70 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 BTN3A2P78410 334 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF763Q0D2J5 394 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 HEPACAMQ14CZ8 416 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 CEBPEQ15744 281 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 AGKQ53H12 422 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 FAM219BQ5XKK7 198 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 FRMPD2BQ6IN97 320 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ADNP2Q6IQ32 1131 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 CCDC121Q6ZUS5 278 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF573Q86YE8 665 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 MISPQ8IVT2 679 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 RIMKLAQ8IXN7 391 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 SLC43A2Q8N370 569 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ZCCHC7Q8N3Z6 543 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 LIX1Q8N485 282 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 NATD1Q8N6N6 113 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 CSNK1A1LQ8N752 337 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ACOT4Q8N9L9 421 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 OR56B1Q8NGI3 324 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 C8orf46Q8TAG6 207 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 C16orf78Q8WTQ4 265 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 PCNPQ8WW12 178 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 LIPHQ8WWY8 451 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 TESCQ96BS2 214 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 TM4SF18Q96CE8 201 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 RCHY1Q96PM5 261 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 RASL10BQ96S79 203 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ZBTB18Q99592 522 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 GPA33Q99795 319 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 C1orf50Q9BV19 199 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ZNF717Q9BY31 904 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 DPY30Q9C005 99 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 EFCAB1Q9HAE3 211 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 PLEKHA3Q9HB20 300 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 FANCEQ9HB96 536 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 LYRM4Q9HD34 91 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 LYARQ9NX58 379 aaKnown RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 MS4A12Q9NXJ0 267 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 TAS2R7Q9NYW3 318 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 TMEM9Q9P0T7 183 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ARMCX1Q9P291 453 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 ATP6V1HQ9UI12 483 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 MGAT4BQ9UQ53 548 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 POLR3HQ9Y535 204 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 NOTCH2Q04721 2471 aa4.01□□□□□ -1.77
CCDC39-202ENST00000471307 NUP214P35658 2090 aaPredicted RBP4.01□□□□□ -1.77
CCDC39-202ENST00000471307 CNOT1A5YKK6 2376 aaKnown RBP4□□□□□ -1.77
CCDC39-202ENST00000471307 DMDP11532 3685 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 GVINP1Q7Z2Y8 2422 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 USP34Q70CQ2 3546 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 MYO15AQ9UKN7 3530 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 A0A087X0K7 114 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 A0A0A6YYD5 115 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 LOC100653049A0A140TA62 436 aa4□□□□□ -1.77
CCDC39-202ENST00000471307 A0A1W2PP18 115 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms