RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 F2RP25116 425 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 PSMA5P28066 241 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 LOXP28300 417 aaPredicted RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CEACAM3P40198 252 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CD86P42081 329 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CCNG1P51959 295 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CRISP1P54107 249 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 PPP1CBP62140 327 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 IHHQ14623 411 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 RBMY1FQ15415 496 aaKnown RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 MPV17L2Q567V2 206 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CCNJQ5T5M9 372 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 PDIK1LQ8N165 341 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 LIX1Q8N485 282 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 EID2Q8N6I1 236 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 ZFP41Q8N8Y5 198 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 TRPV1Q8NER1 839 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 OR2T3Q8NH03 318 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 STMN2Q93045 179 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CNDP1Q96KN2 507 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 C12orf42Q96LP6 360 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 SERPINB12Q96P63 405 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 HSD17B10Q99714 261 aaKnown RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 RHOXF2Q9BQY4 288 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 RIBC2Q9H4K1 309 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 GORASP2Q9H8Y8 452 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 NEK6Q9HC98 313 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 C8orf17Q9NRJ1 99 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 HPF1Q9NWY4 346 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 C21orf62Q9NYP8 219 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 EPS15L1Q9UBC2 864 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 TRMT112Q9UI30 125 aaKnown RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CTNNA3Q9UI47 895 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 PTBP2Q9UKA9 531 aaKnown RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 ING4Q9UNL4 249 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 ST3GAL6Q9Y274 331 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 KCNE3Q9Y6H6 103 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 DNAH12Q6ZR08 3092 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 COL11A1P12107 1806 aaPredicted RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 C2CD3Q4AC94 2353 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 ZDBF2Q9HCK1 2354 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CAMTA1Q9Y6Y1 1673 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 CELSR3Q9NYQ7 3312 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 MYO9BQ13459 2157 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 EYSQ5T1H1 3165 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 MED1Q15648 1581 aaPredicted RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 USP9YO00507 2555 aaPredicted RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 AKAP13Q12802 2813 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 UTP20O75691 2785 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 CNTNAP1P78357 1384 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 POLQO75417 2590 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 IGHV3-49A0A0A0MS15 119 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TRAV19A0A0A6YYK7 116 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 IGHV1-3A0A0C4DH29 117 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 A0A1B0GVL5 298 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 SNTNA6NMZ2 147 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 GPR89AB7ZAQ6 455 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 L7N2F9 121 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 HAS3O00219 553 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 PPP1R2P9O14990 202 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 ANGPT2O15123 496 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TIMM8AO60220 97 aaPredicted RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 EEDO75530 441 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 SLC22A5O76082 557 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 KLHL2O95198 593 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TMEM50AO95807 157 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TSPAN12O95859 305 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 NDUFB10O96000 172 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 CYB5R3P00387 301 aaPredicted RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 LHBP01229 141 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 GPR89BP0CG08 455 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 HRES1P13985 223 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 ATP1B2P14415 290 aaPredicted RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 WARSP23381 471 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TGFBR2P37173 567 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 SYKP43405 635 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 HCAR3P49019 387 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 PRLHRP49683 370 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 GPX6P59796 221 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 YWHAGP61981 247 aaKnown RBP eCLIP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 ADARB1P78563 741 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TNFRSF9Q07011 255 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TWF1Q12792 350 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 ECH1Q13011 328 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 RCAN2Q14206 197 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 PGGHGQ32M88 737 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 FAM222AQ5U5X8 452 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 H2BFWTQ7Z2G1 175 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 EFL1Q7Z2Z2 1120 aaKnown RBP0.48□□□□□ -2.33
UBXN4-207ENST00000471246 SLC35G3Q8N808 338 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 FBXL13Q8NEE6 735 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 SDR9C7Q8NEX9 313 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 OR2L3Q8NG85 312 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 OR1L4Q8NGR5 311 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 RHEBL1Q8TAI7 183 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 CXorf40AQ8TE69 158 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 IFT74Q96LB3 600 aa0.48□□□□□ -2.33
UBXN4-207ENST00000471246 TCEANC2Q96MN5 208 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms