RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MED29Q9NX70 200 aa7.84□□□□□ -1.15
SF3A1-206ENST00000471037 UBAP1Q9NZ09 502 aa7.84□□□□□ -1.15
SF3A1-206ENST00000471037 SLC22A23A1A5C7 686 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OR6C68A6NDL8 312 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OR6C65A6NJZ3 312 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF587BE7ETH6 402 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 PRODHO43272 600 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 TCF21O43680 179 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 WBP4O75554 376 aaKnown RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 TRMUO75648 421 aaKnown RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 IGKV3-15P01624 115 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 IGLV1-44P01699 117 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OR4A8P0C604 315 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 CCDC159P0C7I6 412 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 CDKN2AP42771 156 aaKnown RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 IDH3GP51553 393 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 CLRN1P58418 232 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 LGALS3BPQ08380 585 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 TMED1Q13445 227 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 CARTPTQ16568 116 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 RBM48Q5RL73 367 aaKnown RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 C6orf141Q5SZD1 244 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 AADACL4Q5VUY2 407 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 PLBD1Q6P4A8 553 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 DNM1P34Q6PK57 102 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 CPOQ8IVL8 374 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 CYB561A3Q8NBI2 242 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 NOXO1Q8NFA2 376 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 NUP37Q8NFH4 326 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OR4F15Q8NGB8 312 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OR2T4Q8NH00 348 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 CNIH3Q8TBE1 160 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 APH1BQ8WW43 257 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 HDAC2Q92769 488 aaKnown RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF566Q969W8 418 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OTULINQ96BN8 352 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 C1orf159Q96HA4 380 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF582Q96NG8 517 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OR2M2Q96R28 347 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 NR1H4Q96RI1 486 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 NMNAT3Q96T66 252 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 DDOQ99489 341 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 KCNS3Q9BQ31 491 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 EMC6Q9BV81 110 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 MRPL13Q9BYD1 178 aaKnown RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 YTHDF1Q9BYJ9 559 aaKnown RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 NMNAT2Q9BZQ4 307 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 RAB1BQ9H0U4 201 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 OCEL1Q9H607 264 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF442Q9H7R0 627 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 PLCXD1Q9NUJ7 323 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 DNAJC27Q9NZQ0 273 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 VSX1Q9NZR4 365 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 H2AFY2Q9P0M6 372 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-206ENST00000471037 BLOC1S6Q9UL45 172 aa7.83□□□□□ -1.16
SF3A1-206ENST00000471037 HEATR1Q9H583 2144 aaKnown RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 SLC22A31A6NKX4 558 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 FAM183AA6NL82 134 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 LILRA1O75019 489 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 ENTPD6O75354 484 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 SLC43A1O75387 559 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF432O94892 652 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 CECR9P0C854 216 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 PGA4P0DJD7 388 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 PGA3P0DJD8 388 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 HOXB1P14653 301 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 CRABP1P29762 137 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 HTR1FP30939 366 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 FMO3P31513 532 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 CSNK1A1P48729 337 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 CENPAP49450 140 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 SELENOPP49908 381 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 CHN2P52757 468 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 BLVRAP53004 296 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 SH3BGRP55822 239 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 UBE2NP61088 152 aaKnown RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 RUNX1T1Q06455 604 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 CAMK2DQ13557 499 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 SLC35D3Q5M8T2 416 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 THEM4Q5T1C6 240 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 LCN1P1Q5VSP4 162 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 LAIR2Q6ISS4 152 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 NIPAL3Q6P499 406 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 ANKRD16Q6P6B7 361 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 UGT2A3Q6UWM9 527 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 ZBTB46Q86UZ6 589 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 TMEM123Q8N131 208 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF786Q8N393 782 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 LINC01356Q8N9X3 169 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 NEU4Q8WWR8 484 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 BCL2L2Q92843 193 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 PTP4A1Q93096 173 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 ALKBH3Q96Q83 286 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-206ENST00000471037 RBP7Q96R05 134 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 LINC00470Q9BZP3 86 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 RACGAP1Q9H0H5 632 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 SYT4Q9H2B2 425 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 NELFAQ9H3P2 528 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 B3GAT2Q9NPZ5 323 aa7.82□□□□□ -1.16
SF3A1-206ENST00000471037 RPRD1BQ9NQG5 326 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms