RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 RAD51DO75771 328 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 LYZL6O75951 148 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 WNT11O96014 354 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 SERPINA3P01011 423 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 HLA-DPB1P04440 258 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 ITGA5P08648 1049 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 ADRA2AP08913 450 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 CPEP16870 476 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 ZNF32P17041 273 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 IGHV1-2P23083 117 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 DCTDP32321 178 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 OPRL1P41146 370 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 HTR5AP47898 357 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 SLC6A9P48067 706 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 TGM4P49221 684 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 TPTEP56180 551 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 GALK2Q01415 458 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 SLC3A1Q07837 685 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 GSG1Q2KHT4 349 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 TBRG1Q3YBR2 411 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 CFAP77Q6ZQR2 320 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 BHLHA15Q7RTS1 189 aaPredicted RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 MRGPRGQ86SM5 289 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 CXorf67Q86X51 503 aaPredicted RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 SKA3Q8IX90 412 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 C17orf78Q8N4C9 275 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 RFLNBQ8N5W9 214 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 ZNF283Q8N7M2 679 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 ZNF676Q8N7Q3 588 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 ZFP41Q8N8Y5 198 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 NAXEQ8NCW5 288 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 ZNF420Q8TAQ5 688 aaPredicted RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 RAB2BQ8WUD1 216 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 TMIGD2Q96BF3 282 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 DGCR14Q96DF8 476 aaKnown RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 FBXO17Q96EF6 278 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 PELI1Q96FA3 418 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 MAP6Q96JE9 813 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 USB1Q9BQ65 265 aaKnown RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 ZNF649Q9BS31 505 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 FUNDC2Q9BWH2 189 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 OR2H1Q9GZK4 316 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 MOB1AQ9H8S9 216 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 EXOSC4Q9NPD3 245 aaKnown RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 OBP2BQ9NPH6 170 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 FBXL3Q9UKT7 428 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 SSR3Q9UNL2 185 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 R4GMQ9 66 aa8.56□□□□□ -1.04
CCM2-204ENST00000470837 TLN1Q9Y490 2541 aaKnown RBP8.56□□□□□ -1.04
CCM2-204ENST00000470837 A0A0G2JNJ9 132 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 LOC100506127A0A0U1RQW1 187 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 TMEM212A6NML5 194 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 F5H5K5 113 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 AIREO43918 545 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 CGAP01215 116 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 HLA-HP01893 362 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 ANXA2P07355 339 aaKnown RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 CD53P19397 219 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 COX5AP20674 150 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 PAX7P23759 505 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 GABRA5P31644 462 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 APLNRP35414 380 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 LIPAP38571 399 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 CD79BP40259 229 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 PSMB10P40306 273 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 CX3CR1P49238 355 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 GDI2P50395 445 aaKnown RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 TMBIM6P55061 237 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 RAB1AP62820 205 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 MRPL49Q13405 166 aaKnown RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 TPBGQ13641 420 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 ALKBH1Q13686 389 aaKnown RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 CDK5R1Q15078 307 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 HIKESHIQ53FT3 197 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 PABPC1L2AQ5JQF8 200 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 SFRP5Q5T4F7 317 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 ZNF684Q5T5D7 378 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 BCL2L15Q5TBC7 163 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 COMMD2Q86X83 199 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 PHC2Q8IXK0 858 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 GABRG1Q8N1C3 465 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 MS4A15Q8N5U1 240 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 ZNF433Q8N7K0 673 aaPredicted RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 ZNF485Q8NCK3 441 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 GALNT11Q8NCW6 608 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 STEAP2Q8NFT2 490 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 OR5AK2Q8NH90 309 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 OR1F12Q8NHA8 337 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 PRR7Q8TB68 274 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 ASB5Q8WWX0 329 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 THRSPQ92748 146 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 BCL2L2Q92843 193 aaPredicted RBP8.55□□□□□ -1.04
CCM2-204ENST00000470837 MUCL1Q96DR8 90 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 SMIM19Q96E16 107 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 AMELYQ99218 206 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 KCNJ15Q99712 375 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 COQ7Q99807 217 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 BCL7BQ9BQE9 202 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 TMED9Q9BVK6 235 aa8.55□□□□□ -1.04
CCM2-204ENST00000470837 BRD7Q9NPI1 651 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms