RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	FGF23	Q9GZV9	251 aa	Predicted RBP	2.59	□□□□□ -1.99
SSB-209	ENST00000470621	OR51M1	Q9H341	326 aa		2.59	□□□□□ -1.99
SSB-209	ENST00000470621	LRRIQ3	A6PVS8	624 aa	Predicted RBP	2.58	□□□□□ -2
SSB-209	ENST00000470621	DNASE2	O00115	360 aa	Predicted RBP	2.58	□□□□□ -2
SSB-209	ENST00000470621	REM1	O75628	298 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	HLA-DQB1	P01920	261 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	ACSM4	P0C7M7	580 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	SLC2A3	P11169	496 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	GGT1	P19440	569 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	CDK5	Q00535	292 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	OR7A5	Q15622	319 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	IGFBP7	Q16270	282 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	TMEM107	Q6UX40	140 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	BRD3OS	Q6XYD6	125 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	SNX20	Q7Z614	316 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	KCNG3	Q8TAE7	436 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	SLC25A46	Q96AG3	418 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	TMEM9B	Q9NQ34	198 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	TRMT112	Q9UI30	125 aa	Known RBP	2.58	□□□□□ -2
SSB-209	ENST00000470621	VANGL2	Q9ULK5	521 aa		2.58	□□□□□ -2
SSB-209	ENST00000470621	AHDC1	Q5TGY3	1603 aa	Predicted RBP	2.57	□□□□□ -2
SSB-209	ENST00000470621	WARS	P23381	471 aa	Known RBP	2.57	□□□□□ -2
SSB-209	ENST00000470621	HCAR3	P49019	387 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	CDKN2D	P55273	166 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	ADARB1	P78563	741 aa	Known RBP	2.57	□□□□□ -2
SSB-209	ENST00000470621	DDX39B	Q13838	428 aa	Known RBP	2.57	□□□□□ -2
SSB-209	ENST00000470621	SOHLH1	Q5JUK2	328 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	GPR107	Q5VW38	600 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	OR13G1	Q8NGZ3	307 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	SHC3	Q92529	594 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	MICU1	Q9BPX6	476 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	RACGAP1	Q9H0H5	632 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	SLC2A8	Q9NY64	477 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	HYOU1	Q9Y4L1	999 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	SHROOM3	Q8TF72	1996 aa		2.57	□□□□□ -2
SSB-209	ENST00000470621	SCN4A	P35499	1836 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	OR6C74	A6NCV1	312 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	UBXN8	O00124	270 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	NVL	O15381	856 aa	Known RBP	2.56	□□□□□ -2
SSB-209	ENST00000470621	KLHL41	O60662	606 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	TNNI1	P19237	187 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	NAA10	P41227	235 aa	Predicted RBP	2.56	□□□□□ -2
SSB-209	ENST00000470621	P2RX1	P51575	399 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	TAS2R31	P59538	309 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	PPP1CB	P62140	327 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	CRADD	P78560	199 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	PRR3	P79522	188 aa	Known RBP	2.56	□□□□□ -2
SSB-209	ENST00000470621	MPV17L2	Q567V2	206 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	RNASE13	Q5GAN3	156 aa	Known RBP	2.56	□□□□□ -2
SSB-209	ENST00000470621	AP1AR	Q63HQ0	302 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	CDR2L	Q86X02	465 aa	Predicted RBP	2.56	□□□□□ -2
SSB-209	ENST00000470621	ARL6IP6	Q8N6S5	226 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	NECAB1	Q8N987	351 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	COL21A1	Q96P44	957 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	TEKT3	Q9BXF9	490 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621	C8orf17	Q9NRJ1	99 aa		2.56	□□□□□ -2
SSB-209	ENST00000470621		H7C417	338 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	IGLV3-25	P01717	112 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	CTSL	P07711	333 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	RAB3A	P20336	220 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	CCNG1	P51959	295 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	ACLY	P53396	1101 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	PPM1L	Q5SGD2	360 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	MBOAT1	Q6ZNC8	495 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	TMEM256	Q8N2U0	113 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	HSD17B10	Q99714	261 aa	Known RBP	2.55	□□□□□ -2
SSB-209	ENST00000470621	TBL1Y	Q9BQ87	522 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	EXTL2	Q9UBQ6	330 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	MTFP1	Q9UDX5	166 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	ATAD2B	Q9ULI0	1458 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	TMCC3	Q9ULS5	477 aa		2.55	□□□□□ -2
SSB-209	ENST00000470621	IGKV1-8	A0A0C4DH67	115 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	SMCO2	A6NFE2	343 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	VGLL3	A8MV65	326 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621		K7EMT4	169 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	CHST1	O43916	411 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	FKBP6	O75344	327 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	ME2	P23368	584 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	CCNA1	P78396	465 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	TMEM150A	Q86TG1	271 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	NPW	Q8N729	165 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	COX18	Q8N8Q8	333 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	C11orf72	Q8NBR9	251 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	C1orf198	Q9H425	327 aa		2.54	□□□□□ -2
SSB-209	ENST00000470621	CHST10	O43529	356 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	NDUFB10	O96000	172 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	UQCRFS1P1	P0C7P4	283 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	ZNF688	P0C7X2	276 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	PABPC4L	P0CB38	370 aa	Known RBP	2.53	□□□□□ -2
SSB-209	ENST00000470621	FOXN2	P32314	431 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	TGM3	Q08188	693 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	QPRT	Q15274	297 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	CHRNA6	Q15825	494 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	MRPL23	Q16540	153 aa	Known RBP	2.53	□□□□□ -2
SSB-209	ENST00000470621	SLC8B1	Q6J4K2	584 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	NKAIN4	Q8IVV8	208 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	TMEM105	Q8N8V8	129 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	ST20-AS1	Q8NBB2	130 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	OR9A2	Q8NGT5	310 aa		2.53	□□□□□ -2
SSB-209	ENST00000470621	RBBP8	Q99708	897 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms