RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TGFBR3Q03167 851 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 SCRN3Q0VDG4 424 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 ECH1Q13011 328 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 ALKBH1Q13686 389 aaKnown RBP13.28□□□□□ -0.28
COL4A5-203ENST00000470339 ANKRD16Q6P6B7 361 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 Q6ZT83 130 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 LRRC18Q8N456 261 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 ZFP41Q8N8Y5 198 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 CNEP1R1Q8N9A8 125 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 ST6GALNAC3Q8NDV1 305 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 OR10S1Q8NGN2 331 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 OR51E2Q9H255 320 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 PNRC2Q9NPJ4 139 aaKnown RBP13.28□□□□□ -0.28
COL4A5-203ENST00000470339 CENPMQ9NSP4 180 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 SSR3Q9UNL2 185 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 TIMM10BQ9Y5J6 103 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 SHANK1Q9Y566 2161 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 ACOD1A6NK06 481 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 RER1O15258 196 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 GPX5O75715 221 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 TOXO94900 526 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 IL18BPO95998 194 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 CGAP01215 116 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 GLI4P10075 376 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 CD8BP10966 210 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 HOXB1P14653 301 aaPredicted RBP13.27□□□□□ -0.29
COL4A5-203ENST00000470339 B4GALT1P15291 398 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 PSMB10P40306 273 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 GDI2P50395 445 aaKnown RBP13.27□□□□□ -0.29
COL4A5-203ENST00000470339 MMP16P51512 607 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 FOXF2Q12947 444 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 CNPY1Q3B7I2 92 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 ZNF829Q3KNS6 432 aaPredicted RBP13.27□□□□□ -0.29
COL4A5-203ENST00000470339 ARL9Q6T311 187 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 PCSK4Q6UW60 755 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 BTLAQ7Z6A9 289 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 SKA3Q8IX90 412 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 CCDC36Q8IYA8 594 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 OR2G2Q8NGZ5 317 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 GHSRQ92847 366 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 STARD4Q96DR4 205 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 PGLYRP3Q96LB9 341 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 SH3GL3Q99963 347 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 SFXN3Q9BWM7 321 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 HDHD2Q9H0R4 259 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 FRRS1LQ9P0K9 344 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 GRIP1Q9Y3R0 1128 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 R4GMQ9 66 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 NBEAQ8NFP9 2946 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 SPTA1P02549 2419 aa13.27□□□□□ -0.29
COL4A5-203ENST00000470339 PNMA8CA0A1B0GUJ8 204 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 TMEM212A6NML5 194 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 SRSF10O75494 262 aaKnown RBP13.26□□□□□ -0.29
COL4A5-203ENST00000470339 RPP14O95059 124 aaKnown RBP13.26□□□□□ -0.29
COL4A5-203ENST00000470339 SERPINA3P01011 423 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 APOC1P02654 83 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 ITGA5P08648 1049 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 UGT2B10P36537 528 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 RPS25P62851 125 aaKnown RBP13.26□□□□□ -0.29
COL4A5-203ENST00000470339 SLC3A1Q07837 685 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 LY6DQ14210 128 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 RAB35Q15286 201 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 TAF13Q15543 124 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 SLC36A2Q495M3 483 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 CCDC92Q53HC0 331 aaPredicted RBP13.26□□□□□ -0.29
COL4A5-203ENST00000470339 ELFN2Q5R3F8 820 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 OR7E24Q6IFN5 339 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 KLHL24Q6TFL4 600 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 C1orf162Q8NEQ5 155 aaPredicted RBP13.26□□□□□ -0.29
COL4A5-203ENST00000470339 OR1K1Q8NGR3 316 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 HTRA1Q92743 480 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 BCL2L2Q92843 193 aaPredicted RBP13.26□□□□□ -0.29
COL4A5-203ENST00000470339 CHCHD6Q9BRQ6 235 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 ATPIF1Q9UII2 106 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 PROCRQ9UNN8 238 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 GSTK1Q9Y2Q3 226 aa13.26□□□□□ -0.29
COL4A5-203ENST00000470339 LOC100506127A0A0U1RQW1 187 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 OR4C45A6NMZ5 311 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 SGCEO43556 437 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 RGS9O75916 674 aaPredicted RBP13.25□□□□□ -0.29
COL4A5-203ENST00000470339 WNT11O96014 354 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 MMP7P09237 267 aaPredicted RBP13.25□□□□□ -0.29
COL4A5-203ENST00000470339 COX5AP20674 150 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 OPRM1P35372 400 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 ARR3P36575 388 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 NANOS3P60323 173 aaKnown RBP13.25□□□□□ -0.29
COL4A5-203ENST00000470339 TUBA1BP68363 451 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 FABP5Q01469 135 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 P2RY6Q15077 328 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 YIF1BQ5BJH7 314 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 TMEM211Q6ICI0 200 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 VWA1Q6PCB0 445 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 PAMR1Q6UXH9 720 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 BEND4Q6ZU67 534 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 TUBA1AQ71U36 451 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 SPATC1Q76KD6 591 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 CATSPERDQ86XM0 798 aa13.25□□□□□ -0.29
COL4A5-203ENST00000470339 OR5AK2Q8NH90 309 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms