RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CDADC1Q9BWV3 514 aa12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 VCX3BQ9H321 246 aa12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 WDR76Q9H967 626 aa12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 HAO2Q9NYQ3 351 aa12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 PLEK2Q9NYT0 353 aa12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 GDF2Q9UK05 429 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 ABCA2Q9BZC7 2435 aa12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 TLN2Q9Y4G6 2542 aa12.93□□□□□ -0.34
CDC42SE1-203ENST00000470278 HS3ST1O14792 307 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 RER1O15258 196 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 SYNGR3O43761 229 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 PSKH1P11801 424 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 GABRB1P18505 474 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 APEX1P27695 318 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 HTR1FP30939 366 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 APLNRP35414 380 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 CDH11P55287 796 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 RPS7P62081 194 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 NKX6-1P78426 367 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 ADARB1P78563 741 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 TMED1Q13445 227 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 CCDC92Q53HC0 331 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 MEDAGQ5VYS4 303 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 TTC23Q5W5X9 447 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 CORO6Q6QEF8 472 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 C20orf204Q6ZNR8 217 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 CFAP77Q6ZQR2 320 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 MEPCEQ7L2J0 689 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 SHFQ7M4L6 423 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 ERI1Q8IV48 349 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 LINC00346Q8IVM7 164 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 OR2AJ1Q8NGZ0 328 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 AKR7LQ8NHP1 331 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 AKAP1Q92667 903 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 RFKQ969G6 155 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZMYND19Q96E35 227 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 COQ7Q99807 217 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 APOL4Q9BPW4 351 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 ADI1Q9BV57 179 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 TMUB1Q9BVT8 246 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 CXXC4Q9H2H0 198 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 LIME1Q9H400 295 aa12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 PNRC2Q9NPJ4 139 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 DDX28Q9NUL7 540 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 WARS2Q9UGM6 360 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 FN1P02751 2386 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-203ENST00000470278 HEATR1Q9H583 2144 aaKnown RBP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 LOC100509620A0A075B734 347 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 H0YAE9 185 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZNF593O00488 134 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 SPARCP09486 303 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 HOXB4P17483 251 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 PCSK6P29122 969 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 HTR5AP47898 357 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 GDI2P50395 445 aaKnown RBP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 HGFACQ04756 655 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ECH1Q13011 328 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 IL18R1Q13478 541 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 OCLNQ16625 522 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 KRTAP27-1Q3LI81 207 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ELFN2Q5R3F8 820 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZNF691Q5VV52 312 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 B3GLCTQ6Y288 498 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 RHOUQ7L0Q8 258 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 BCDIN3DQ7Z5W3 292 aaKnown RBP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ENTHD1Q8IYW4 607 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 DHRSXQ8N5I4 330 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZNF611Q8N823 705 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 OR6N2Q8NGY6 317 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 OR1F12Q8NHA8 337 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ST7LQ8TDW4 575 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 FBXW5Q969U6 566 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 MAP6Q96JE9 813 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZNF582Q96NG8 517 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZNF442Q9H7R0 627 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 H2AFY2Q9P0M6 372 aaPredicted RBP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 POU2F3Q9UKI9 436 aa12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDC42SE1-203ENST00000470278 ROS1P08922 2347 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 C5orf49A4QMS7 147 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 SELENOFO60613 162 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 NR4A1P22736 598 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 CAPGP40121 348 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 RPS27P42677 84 aaKnown RBP12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 ART1P52961 327 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 GALK2Q01415 458 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 POU4F2Q12837 409 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 ZNF544Q6NX49 715 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 PAMR1Q6UXH9 720 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 SLC16A9Q7RTY1 509 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 DPY19L4Q7Z388 723 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 DCXRQ7Z4W1 244 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 C1orf174Q8IYL3 243 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 PAQR4Q8N4S7 273 aaPredicted RBP12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 RHOXF1Q8NHV9 184 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 OTOSQ8NHW6 89 aa12.9□□□□□ -0.34
CDC42SE1-203ENST00000470278 UBE2FQ969M7 185 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms