RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CSTAP01040 98 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 TRBC1P01850 177 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 BGLAPP02818 100 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 S100A9P06702 114 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 UBTFL6P0CB48 400 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 SMIM10L1P0DMW3 83 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 ADRB3P13945 408 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 CRISP2P16562 243 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 CNR1P21554 472 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 LONP1P36776 959 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 SLC26A3P40879 764 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 RPS15AP62244 130 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 RPEL1Q2QD12 228 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 TRMT5Q32P41 509 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 HNRNPA1L2Q32P51 320 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 TSPO2Q5TGU0 170 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 AADACL4Q5VUY2 407 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 UBE2UQ5VVX9 321 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 GPR107Q5VW38 600 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 ANKRD22Q5VYY1 191 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 C16orf87Q6PH81 154 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 ULK3Q6PHR2 472 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 MRPL21Q7Z2W9 205 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 CAMK2N1Q7Z7J9 78 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF547Q8IVP9 402 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 OR5T3Q8NGG3 340 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 OR8K3Q8NH51 312 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 OR6X1Q8NH79 312 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 MCOLN3Q8TDD5 553 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 CA5BP1Q8WTZ4 195 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 RAB1CQ92928 201 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 FAM3DQ96BQ1 224 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 C19orf60Q96EN9 201 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 RNF185Q96GF1 192 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 SMIM10Q96HG1 83 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 COL21A1Q96P44 957 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 CSPG4P5Q96PW8 444 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 MICU1Q9BPX6 476 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 STMN4Q9H169 189 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 PIGUQ9H490 435 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 CLMPQ9H6B4 373 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 ZC4H2Q9NQZ6 224 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 TP53TG5Q9Y2B4 290 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 RCL1Q9Y2P8 373 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 A0A1W2PPV4 95 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 PRSS37A4D1T9 235 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 NCBP2LA6PVI3 153 aaKnown RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 RNF113AO15541 343 aaKnown RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 FLOT1O75955 427 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 FARS2O95363 451 aaKnown RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 LSM8O95777 96 aaKnown RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 TGM6O95932 706 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 IVLP07476 585 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 DCNP07585 359 aaKnown RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 KRT16P08779 473 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 ZDHHC11BP0C7U3 371 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 STAG3L2P0CL84 134 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF30P17039 623 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 RAB4AP20338 218 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 GABRR2P28476 465 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 BMI1P35226 326 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 MAS1LP35410 378 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 NUP62P37198 522 aaPredicted RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 CD151P48509 253 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 CCR6P51684 374 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 KRTAP10-1P60331 282 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 SLC7A9P82251 487 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF33AQ06730 810 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 SMARCB1Q12824 385 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 PON3Q15166 354 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 PTGES3Q15185 160 aaKnown RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 PSG5Q15238 335 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 STK11Q15831 433 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 GABRA6Q16445 453 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 TTLL9Q3SXZ7 439 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 CCNJQ5T5M9 372 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 MLIPQ5VWP3 458 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 ZFP2Q6ZN57 461 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF621Q6ZSS3 439 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 OAFQ86UD1 273 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 STPG2Q8N412 459 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 MREGQ8N565 214 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 CCDC54Q8NEL0 328 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 LKAAEAR1Q8TD35 194 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 CD300LFQ8TDQ1 290 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 MITD1Q8WV92 249 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 PIH1D2Q8WWB5 315 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 EEF1AKMT3Q96AZ1 226 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 APH1AQ96BI3 265 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 DNAJC19Q96DA6 116 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 DNAJC1Q96KC8 554 aaKnown RBP2.34□□□□□ -2.03
BRCA2-202ENST00000470094 TSSK3Q96PN8 268 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 XKR8Q9H6D3 395 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 HAUS4Q9H6D7 363 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 LZTFL1Q9NQ48 299 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 PRSS16Q9NQE7 514 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF226Q9NYT6 803 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 SLC25A37Q9NYZ2 338 aa2.34□□□□□ -2.03
BRCA2-202ENST00000470094 YARS2Q9Y2Z4 477 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms