RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 OR6X1Q8NH79 312 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 IGFBPL1Q8WX77 278 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 SLC25A44Q96H78 314 aaPredicted RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 OR2M2Q96R28 347 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF649Q9BS31 505 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 TMEM204Q9BSN7 226 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 SF3B5Q9BWJ5 86 aaKnown RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 MRPL13Q9BYD1 178 aaKnown RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 TTTY10Q9BZA0 68 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 FAM192AQ9GZU8 254 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 RACGAP1Q9H0H5 632 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ERVK13-1Q9NX77 482 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 CEPT1Q9Y6K0 416 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 TMEM129A0AVI4 362 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 DAPL1A0PJW8 107 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 CCDC160A6NGH7 325 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF726A6NNF4 738 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 H3BSA7 217 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 HSMCR30P0CW71 290 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 CRABP1P29762 137 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 HCCSP53701 268 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ACTC1P68032 377 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ACTA1P68133 377 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF85Q03923 595 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 RASGEF1BQ0VAM2 473 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 SFRP5Q5T4F7 317 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 GPR107Q5VW38 600 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 DNM1P34Q6PK57 102 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 SSX6Q7RTT6 188 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.9□□□□□ -0.5
LINC00173-201ENST00000470091 TIGD4Q8IY51 512 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 KLHL36Q8N4N3 616 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
LINC00173-201ENST00000470091 RNF128Q8TEB7 428 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 NSMAFQ92636 917 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 NMD3Q96D46 503 aaKnown RBP11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ADAD1Q96M93 576 aaKnown RBP11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ALG8Q9BVK2 526 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 HDHD5Q9BXW7 423 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 NAA50Q9GZZ1 169 aaKnown RBP11.9□□□□□ -0.5
LINC00173-201ENST00000470091 INPP5EQ9NRR6 644 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 NDUFA13Q9P0J0 144 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 COPS3Q9UNS2 423 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 COA3Q9Y2R0 106 aaPredicted RBP11.9□□□□□ -0.5
LINC00173-201ENST00000470091 RNF115Q9Y4L5 304 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 FLVCR1Q9Y5Y0 555 aa11.9□□□□□ -0.5
LINC00173-201ENST00000470091 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 MXRA5Q9NR99 2828 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 A0A1W2PQL4 384 aaPredicted RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 AKAP8O43823 692 aaKnown RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 AHCYL1O43865 530 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 KHDRBS3O75525 346 aaKnown RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 HLA-DQA2P01906 255 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 CD3EP07766 207 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 YES1P07947 543 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 SOD3P08294 240 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 PSKH1P11801 424 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 PAX1P15863 534 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 TTKP33981 857 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 TGFBR2P37173 567 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 CSNK1A1P48729 337 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 SELENOPP49908 381 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 WNT4P56705 351 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 FAPQ12884 760 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 RNPS1Q15287 305 aaKnown RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 SPHARQ15513 63 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 TAB1Q15750 504 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 TSTQ16762 297 aaKnown RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 CLEC12BQ2HXU8 276 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 ARMCX4Q5H9R4 360 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 TFAP2EQ6VUC0 442 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 SLC16A9Q7RTY1 509 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 GABRG1Q8N1C3 465 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 OR6N2Q8NGY6 317 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 OR52N1Q8NH53 320 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 SPRYD4Q8WW59 207 aaPredicted RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 HSD17B8Q92506 261 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 YIPF6Q96EC8 236 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 COG8Q96MW5 612 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 OPALINQ96PE5 141 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 INTS14Q96SY0 518 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 WDR76Q9H967 626 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 MARCH7Q9H992 704 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 MRPL22Q9NWU5 206 aaKnown RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 ING1Q9UK53 422 aaPredicted RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 KLHDC2Q9Y2U9 406 aa11.89□□□□□ -0.51
LINC00173-201ENST00000470091 RAI1Q7Z5J4 1906 aaPredicted RBP11.89□□□□□ -0.51
LINC00173-201ENST00000470091 STAB1Q9NY15 2570 aa11.88□□□□□ -0.51
LINC00173-201ENST00000470091 FBN3Q75N90 2809 aa11.88□□□□□ -0.51
LINC00173-201ENST00000470091 ZNF432O94892 652 aa11.88□□□□□ -0.51
LINC00173-201ENST00000470091 OR2T7P0C7T2 308 aa11.88□□□□□ -0.51
LINC00173-201ENST00000470091 GAAP10253 952 aa11.88□□□□□ -0.51
LINC00173-201ENST00000470091 LIPAP38571 399 aa11.88□□□□□ -0.51
LINC00173-201ENST00000470091 CDKN1AP38936 164 aa11.88□□□□□ -0.51
LINC00173-201ENST00000470091 GTF2A1P52655 376 aaPredicted RBP11.88□□□□□ -0.51
LINC00173-201ENST00000470091 GALEQ14376 348 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms