RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 OR52A1Q9UKL2 312 aa8.28□□□□□ -1.08
SMC1A-205ENST00000469129 EMC9Q9Y3B6 208 aa8.28□□□□□ -1.08
SMC1A-205ENST00000469129 ETV7Q9Y603 341 aa8.28□□□□□ -1.08
SMC1A-205ENST00000469129 LHFPL6Q9Y693 200 aa8.28□□□□□ -1.08
SMC1A-205ENST00000469129 V9GY05 133 aa8.28□□□□□ -1.08
SMC1A-205ENST00000469129 TNRC6AQ8NDV7 1962 aaKnown RBP8.28□□□□□ -1.08
SMC1A-205ENST00000469129 MED12Q93074 2177 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 IGKV3D-15A0A087WSY6 115 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 A0A1B0GVG6 124 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 LOC107986453A0A1B0GWG9 222 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 A6NL46 340 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CALCBP10092 127 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 AZGP1P25311 298 aaKnown RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CFPP27918 469 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 SOX2P48431 317 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 EVX1P49640 407 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 STARP49675 285 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 SELENOPP49908 381 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 LHX2P50458 406 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 TNFSF10P50591 281 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CAPZA1P52907 286 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CLDN18P56856 261 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 OR10A3P58181 314 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 PPIAP62937 165 aaKnown RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 PITPNAQ00169 270 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 MFGE8Q08431 387 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CLN3Q13286 438 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 RNPS1Q15287 305 aaKnown RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 SGCAQ16586 387 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 PYDC2Q56P42 97 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 RIPPLY2Q5TAB7 128 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 STAC2Q6ZMT1 411 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CHMP1BQ7LBR1 199 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 NR2C2APQ86WQ0 139 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 ZNF433Q8N7K0 673 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 NKAIN3Q8N8D7 197 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 POC5Q8NA72 575 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 GJC3Q8NFK1 279 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 IL17RDQ8NFM7 739 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 OR13C3Q8NGS6 347 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CPT1CQ8TCG5 803 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 ABTB1Q969K4 478 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 WACQ9BTA9 647 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 SCNM1Q9BWG6 230 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 SLC6A15Q9H2J7 730 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 EXO5Q9H790 373 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 RNF122Q9H9V4 155 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 BRD7Q9NPI1 651 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 G6PC2Q9NQR9 355 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 PARPBPQ9NWS1 579 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 ASH2LQ9UBL3 628 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 NUFIP1Q9UHK0 495 aaKnown RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 SPATA2Q9UM82 520 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 FOXJ3Q9UPW0 622 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 WASF3Q9UPY6 502 aa8.27□□□□□ -1.09
SMC1A-205ENST00000469129 AK6Q9Y3D8 172 aaKnown RBP8.27□□□□□ -1.09
SMC1A-205ENST00000469129 CACNA1CQ13936 2221 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 hCG_2014768A0A024R1R8 64 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 TRAV17A0A0B4J275 112 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 A0A1B0GVI7 797 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 A0A1W2PPK0 400 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 IFITM5A6NNB3 132 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 PIN1P1O15428 100 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 NKX2-8O15522 239 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 WNT11O96014 354 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 PNPP00491 289 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 SLC2A2P11168 524 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-205ENST00000469129 FCGR2AP12318 317 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 IL7P13232 177 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ATF1P18846 271 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ELK1P19419 428 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 CDAP32320 146 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 RFC3P40938 356 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 INPP1P49441 399 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 IFITM3Q01628 133 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 SCRN3Q0VDG4 424 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 SLC10A1Q14973 349 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ODF4Q2M2E3 257 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 SLC25A35Q3KQZ1 300 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 NRN1LQ496H8 165 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 HACD4Q5VWC8 232 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 OTPQ5XKR4 325 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 PYHIN1Q6K0P9 492 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 LRFN4Q6PJG9 635 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 CORO6Q6QEF8 472 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 IGFL2Q6UWQ7 119 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 CFAP77Q6ZQR2 320 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 MCEMP1Q8IX19 187 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ELMOD2Q8IZ81 293 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ZIC4Q8N9L1 334 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 CCDC54Q8NEL0 328 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 LGALS14Q8TCE9 139 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 C15orf40Q8WUR7 153 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ROBO4Q8WZ75 1007 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 PPP1R14BQ96C90 147 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 SDHCQ99643 169 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-205ENST00000469129 SMAD5Q99717 465 aaKnown RBP8.26□□□□□ -1.09
SMC1A-205ENST00000469129 ZNF416Q9BWM5 594 aa8.26□□□□□ -1.09
SMC1A-205ENST00000469129 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms