RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 CCDC182A6NF36 153 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 OR6C6A6NF89 314 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 SPARCP09486 303 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 FAM157BP0CG42 384 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 PSKH1P11801 424 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 THBS4P35443 961 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 GLRXP35754 106 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 RAD52P43351 418 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 UCP2P55851 309 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 OGFRL1Q5TC84 451 aaPredicted RBP10.31□□□□□ -0.76
VPS13D-204ENST00000469054 AGAP6Q5VW22 663 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 TMEM154Q6P9G4 183 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 CFAP77Q6ZQR2 320 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 MEPCEQ7L2J0 689 aaKnown RBP10.31□□□□□ -0.76
VPS13D-204ENST00000469054 SHFQ7M4L6 423 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 BCDIN3DQ7Z5W3 292 aaKnown RBP10.31□□□□□ -0.76
VPS13D-204ENST00000469054 DTX2Q86UW9 622 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 ERI1Q8IV48 349 aaKnown RBP10.31□□□□□ -0.76
VPS13D-204ENST00000469054 MUC15Q8N387 334 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 OR6N2Q8NGY6 317 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 FAM81AQ8TBF8 368 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 TMEM171Q8WVE6 324 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 IGFBPL1Q8WX77 278 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 MAP6Q96JE9 813 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 C4orf45Q96LM5 186 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 CCL19Q99731 98 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 COQ7Q99807 217 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 HDHD2Q9H0R4 259 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 RNPEPL1Q9HAU8 725 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 PNRC2Q9NPJ4 139 aaKnown RBP10.31□□□□□ -0.76
VPS13D-204ENST00000469054 CBLN4Q9NTU7 201 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 FAM118AQ9NWS6 357 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 IMPAD1Q9NX62 359 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 SMPD3Q9NY59 655 aaPredicted RBP10.31□□□□□ -0.76
VPS13D-204ENST00000469054 EIF3KQ9UBQ5 218 aaKnown RBP10.31□□□□□ -0.76
VPS13D-204ENST00000469054 ATPIF1Q9UII2 106 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 GMPPBQ9Y5P6 360 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 ROS1P08922 2347 aa10.31□□□□□ -0.76
VPS13D-204ENST00000469054 CELSR2Q9HCU4 2923 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 SLC22A31A6NKX4 558 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 DLGAP1O14490 977 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 SLC16A6O15403 523 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 GPRIN2O60269 458 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 SELENOFO60613 162 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 CD8AP01732 235 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 OR4A8P0C604 315 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 SERPINF1P36955 418 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 WNT5AP41221 380 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 RPS23P62266 143 aaKnown RBP10.3□□□□□ -0.76
VPS13D-204ENST00000469054 ECH1Q13011 328 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 ADIPOQQ15848 244 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 LCN1P1Q5VSP4 162 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 UNQ6126/PRO20091Q6UXV3 157 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 DPY19L4Q7Z388 723 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 DCXRQ7Z4W1 244 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 GID4Q8IVV7 300 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 SLC7A6Q92536 515 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 UBE2FQ969M7 185 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 ATF6BQ99941 703 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 TRAF4Q9BUZ4 470 aaPredicted RBP10.3□□□□□ -0.76
VPS13D-204ENST00000469054 BCL2L14Q9BZR8 327 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 ELOVL3Q9HB03 270 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 CMAHPQ9Y471 501 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 CRYBG3Q68DQ2 2970 aa10.3□□□□□ -0.76
VPS13D-204ENST00000469054 B9A039 149 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 F5H5K5 113 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ICMTO60725 284 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 SMPD2O60906 423 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ABHD16AO95870 558 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 LCKP06239 509 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 DBHP09172 617 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 SNRPGP62308 76 aaKnown RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 EIF2B1Q14232 305 aaKnown RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 GGTLC2Q14390 218 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 EFNB3Q15768 340 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 MSMPQ1L6U9 139 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 RSPO1Q2MKA7 263 aaPredicted RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 DEFB113Q30KQ7 82 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 KRTAP27-1Q3LI81 207 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 SLC25A30Q5SVS4 291 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 RGS7BPQ6MZT1 257 aaPredicted RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ARL9Q6T311 187 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 C1orf174Q8IYL3 243 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ZNF101Q8IZC7 436 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ZNF555Q8NEP9 628 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 OR10S1Q8NGN2 331 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ABHD4Q8TB40 342 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ST7LQ8TDW4 575 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 MRPL24Q96A35 216 aaKnown RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 ZNF582Q96NG8 517 aaPredicted RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 DCLRE1CQ96SD1 692 aaKnown RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 OR51B6Q9H340 312 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 CXorf56Q9H5V9 222 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 DDX28Q9NUL7 540 aaKnown RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 TBCCD1Q9NVR7 557 aa10.29□□□□□ -0.76
VPS13D-204ENST00000469054 BEX4Q9NWD9 120 aaPredicted RBP10.29□□□□□ -0.76
VPS13D-204ENST00000469054 HAO2Q9NYQ3 351 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms