RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ZNF32P17041 273 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 CRHBPP24387 322 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 RPS27P42677 84 aaKnown RBP7.1□□□□□ -1.27
HDAC6-216ENST00000468949 SLC6A9P48067 706 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 IDH3GP51553 393 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-216ENST00000468949 RAB1AP62820 205 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 GRB2P62993 217 aaKnown RBP7.1□□□□□ -1.27
HDAC6-216ENST00000468949 ST3GAL4Q11206 333 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 ECH1Q13011 328 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 ENDOGQ14249 297 aaKnown RBP7.1□□□□□ -1.27
HDAC6-216ENST00000468949 RAB35Q15286 201 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 TBC1D28Q2M2D7 210 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 TEX30Q5JUR7 227 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 CORO6Q6QEF8 472 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 ARL9Q6T311 187 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF322Q6U7Q0 402 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-216ENST00000468949 UGT2A3Q6UWM9 527 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 TMPRSS11AQ6ZMR5 421 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 SPATC1Q76KD6 591 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 MDP1Q86V88 176 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 CDC20BQ86Y33 519 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 WFDC8Q8IUA0 241 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 SKA3Q8IX90 412 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 KLHL36Q8N4N3 616 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 SVOPQ8N4V2 548 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 OR52I1Q8NGK6 324 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 OR1J2Q8NGS2 313 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 SPTSSAQ969W0 71 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 SLAMF6Q96DU3 332 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 NR1H4Q96RI1 486 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-216ENST00000468949 ATF6BQ99941 703 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 ALG8Q9BVK2 526 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 MROQ9BYG7 248 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 OR2H1Q9GZK4 316 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 MARCH7Q9H992 704 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 CDH20Q9HBT6 801 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 UBAP1Q9NZ09 502 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 CYB5R1Q9UHQ9 305 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 PSORS1C1Q9UIG5 152 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 GTF2A1LQ9UNN4 478 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 KLF2Q9Y5W3 355 aaPredicted RBP7.1□□□□□ -1.27
HDAC6-216ENST00000468949 MED12LQ86YW9 2145 aa7.1□□□□□ -1.27
HDAC6-216ENST00000468949 NCOA6Q14686 2063 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 A0A1W2PQL4 384 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 OR6C6A6NF89 314 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 PRSS44E7EML9 344 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 M0R1B8 84 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 RER1O15258 196 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 APOC1P02654 83 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 CDK1P06493 297 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 TACSTD2P09758 323 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 PATE4P0C8F1 98 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 CCNOP22674 350 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 CCKARP32238 428 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 GDI2P50395 445 aaKnown RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF83P51522 516 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 RIDAP52758 137 aaKnown RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 GALK2Q01415 458 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 EGR3Q06889 387 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF829Q3KNS6 432 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 KCTD21Q4G0X4 260 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 PABPC1L2AQ5JQF8 200 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 ELFN2Q5R3F8 820 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 HIST2H2BCQ6DN03 193 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 TMEM108Q6UXF1 575 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 UNQ6126/PRO20091Q6UXV3 157 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 CFAP77Q6ZQR2 320 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 PLEKHG7Q6ZR37 379 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 YIPF7Q8N8F6 280 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 AKR7LQ8NHP1 331 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 ZNRF4Q8WWF5 429 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 GGHQ92820 318 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 FBXO17Q96EF6 278 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 ABHD6Q9BV23 337 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 MND1Q9BWT6 205 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 EIF3KQ9UBQ5 218 aaKnown RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 GNG8Q9UK08 70 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 DIMT1Q9UNQ2 313 aaKnown RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 EXOGQ9Y2C4 368 aaKnown RBP7.09□□□□□ -1.27
HDAC6-216ENST00000468949 LHFPL6Q9Y693 200 aa7.09□□□□□ -1.27
HDAC6-216ENST00000468949 F5H5K5 113 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 J3QLW9 94 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 MRPS14O60783 128 aaKnown RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF254O75437 659 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 IGHA1P01876 353 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 MT-ND5P03915 603 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 SCG5P05408 212 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ANXA2P07355 339 aaKnown RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 CBR1P16152 277 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ZNF19P17023 458 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 ALOX5APP20292 161 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 STOMP27105 288 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 KIR2DL3P43628 341 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 GBX2P52951 348 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 HCCSP53701 268 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 TPTEP56180 551 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 SLC35A2P78381 396 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 PSG4Q00888 419 aa7.08□□□□□ -1.28
HDAC6-216ENST00000468949 MRPL28Q13084 256 aaKnown RBP7.08□□□□□ -1.28
HDAC6-216ENST00000468949 GALEQ14376 348 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms