RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FAM169BQ8N8A8 192 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 OR52I1Q8NGK6 324 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 FAM46AQ96IP4 442 aaKnown RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 MROQ9BYG7 248 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 CRLF2Q9HC73 371 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 MED29Q9NX70 200 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 CRNNQ9UBG3 495 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 SLC35F4A4IF30 521 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 PRODHO43272 600 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 CD8AP01732 235 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 ASAH2BP0C7U1 165 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 MYL12AP19105 171 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 PPP5CP53041 499 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.394e-13■■■■□ 20.2
COL27A1-203ENST00000468565 ARF1P84077 181 aaKnown RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 MLLT11Q13015 90 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 SSX1Q16384 188 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 CEACAM16Q2WEN9 425 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 MBOAT2Q6ZWT7 520 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 BCDIN3DQ7Z5W3 292 aaKnown RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 BIVMQ86UB2 503 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 TXNDC15Q96J42 360 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 ADAD1Q96M93 576 aaKnown RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 EMC6Q9BV81 110 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 PLA2G12AQ9BZM1 189 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 C6orf62Q9GZU0 229 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 MEPEQ9NQ76 525 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 MRPS18AQ9NVS2 196 aaKnown RBP12.6□□□□□ -0.39
COL27A1-203ENST00000468565 CLEC2DQ9UHP7 191 aa12.6□□□□□ -0.39
COL27A1-203ENST00000468565 ARFGEF3Q5TH69 2177 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 ZNF726A6NNF4 738 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 ETFDHQ16134 617 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 B3GLCTQ6Y288 498 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 NKAIN4Q8IVV8 208 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 CCDC36Q8IYA8 594 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 HS6ST2Q96MM7 605 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 TAS2R5Q9NYW4 299 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 PEX16Q9Y5Y5 336 aa12.59□□□□□ -0.39
COL27A1-203ENST00000468565 A0A096LPE4 126 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 IGHV1-18A0A0C4DH31 117 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 A0A1W2PPZ6 126 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 C11orf98E9PRG8 122 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 HIST1H2ABP04908 130 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 PSMA1P25786 263 aaKnown RBP12.58□□□□□ -0.39
COL27A1-203ENST00000468565 RAB40BQ12829 278 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 CARD17Q5XLA6 110 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 HIST3H2AQ7L7L0 130 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 ZNF627Q7L945 461 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 MEX3DQ86XN8 651 aaKnown RBP12.58□□□□□ -0.39
COL27A1-203ENST00000468565 OR8D4Q8NGM9 314 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 OR6X1Q8NH79 312 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 TMEM255BQ8WV15 326 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 TMEM239Q8WW34 195 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 HIST1H2ACQ93077 130 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 RFKQ969G6 155 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 ZNF837Q96EG3 531 aaPredicted RBP12.58□□□□□ -0.39
COL27A1-203ENST00000468565 KATNB1Q9BVA0 655 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 CDADC1Q9BWV3 514 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 RNF167Q9H6Y7 350 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 FGF20Q9NP95 211 aaPredicted RBP12.58□□□□□ -0.39
COL27A1-203ENST00000468565 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.39
COL27A1-203ENST00000468565 CBLN4Q9NTU7 201 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 STUB1Q9UNE7 303 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 ATP23Q9Y6H3 246 aa12.58□□□□□ -0.39
COL27A1-203ENST00000468565 ATP6V1G2-DDX39BF2Z307 99 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 TPD52L2O43399 206 aaKnown RBP12.58□□□□□ -0.4
COL27A1-203ENST00000468565 GPX5O75715 221 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 IGKV3-15P01624 115 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 IGLV1-44P01699 117 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 IFNGR1P15260 489 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 CDKN1AP38936 164 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 ZNF45Q02386 682 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 PRKCDQ05655 676 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 OXA1LQ15070 435 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 C11orf71Q6IPW1 123 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 SLC35D2Q76EJ3 337 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 NANOGNBQ7Z5D8 188 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 NRMQ8IXM6 262 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 FBXL14Q8N1E6 418 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 MUC15Q8N387 334 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 LRRC17Q8N6Y2 441 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 CLDN22Q8N7P3 220 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 LIPHQ8WWY8 451 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 RNFT2Q96EX2 444 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 SIAEQ9HAT2 523 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 NDUFB11Q9NX14 153 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 EXOSC1Q9Y3B2 195 aaKnown RBP12.58□□□□□ -0.4
COL27A1-203ENST00000468565 CDH10Q9Y6N8 788 aa12.58□□□□□ -0.4
COL27A1-203ENST00000468565 HTR3EA5X5Y0 456 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 RNF13O43567 381 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 SERPINI2O75830 405 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 OR7A10O76100 309 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 HMGN1P05114 100 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 GPR4P46093 362 aa12.57□□□□□ -0.4
COL27A1-203ENST00000468565 CSNK1A1P48729 337 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms