RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CCDC92Q53HC0 331 aaPredicted RBP20.65■□□□□ 0.9
PTCH1-210ENST00000468211 C1orf94Q6P1W5 598 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 HACD2Q6Y1H2 254 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 ZER1Q7Z7L7 766 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 CYP4Z1Q86W10 505 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 TEX29Q8N6K0 151 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 FAM86B1Q8N7N1 296 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 NANPQ8TBE9 248 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 KCTD14Q9BQ13 255 aaPredicted RBP20.65■□□□□ 0.9
PTCH1-210ENST00000468211 ESM1Q9NQ30 184 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 MMP26Q9NRE1 261 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 TMEM106BQ9NUM4 274 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 ABCD2Q9UBJ2 740 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 EGFL7Q9UHF1 273 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 A0A1W2PRQ8 180 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 OR6C6A6NF89 314 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 SOCS2O14508 198 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 CCDC22O60826 627 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 DIRAS1O95057 198 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 DBHP09172 617 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 SDHAP31040 664 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 ACTG1P63261 375 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 DBPQ10586 325 aaPredicted RBP20.64■□□□□ 0.89
PTCH1-210ENST00000468211 AQP6Q13520 282 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 DGCR6Q14129 220 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 FGD3Q5JSP0 725 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 FAM216AQ8WUB2 273 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 ITLN1Q8WWA0 313 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 C22orf15Q8WYQ4 148 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 HAVCR1Q96D42 359 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 RSRC1Q96IZ7 334 aaKnown RBP20.64■□□□□ 0.89
PTCH1-210ENST00000468211 C7orf34Q96L11 122 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 SIGLEC11Q96RL6 698 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 GPX7Q96SL4 187 aaPredicted RBP20.64■□□□□ 0.89
PTCH1-210ENST00000468211 GPA33Q99795 319 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 NUAK2Q9H093 628 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 VSX1Q9NZR4 365 aaPredicted RBP20.64■□□□□ 0.89
PTCH1-210ENST00000468211 IER3IP1Q9Y5U9 82 aa20.64■□□□□ 0.89
PTCH1-210ENST00000468211 RER1O15258 196 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 KHDRBS3O75525 346 aaKnown RBP20.63■□□□□ 0.89
PTCH1-210ENST00000468211 MDH1P40925 334 aaKnown RBP20.63■□□□□ 0.89
PTCH1-210ENST00000468211 CDKN2AP42771 156 aaKnown RBP20.63■□□□□ 0.89
PTCH1-210ENST00000468211 PSME3P61289 254 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 SEC61A1P61619 476 aaKnown RBP20.63■□□□□ 0.89
PTCH1-210ENST00000468211 GLB1L2Q8IW92 636 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 ZNF283Q8N7M2 679 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 OR1F12Q8NHA8 337 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 ST7LQ8TDW4 575 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 SAMD8Q96LT4 415 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 TSSK2Q96PF2 358 aa20.63■□□□□ 0.89
PTCH1-210ENST00000468211 DCTN6O00399 190 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 TUBG1P23258 451 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 GATA3P23771 443 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 LSM6P62312 80 aaKnown RBP20.62■□□□□ 0.89
PTCH1-210ENST00000468211 HLXQ14774 488 aaPredicted RBP20.62■□□□□ 0.89
PTCH1-210ENST00000468211 ZMYND11Q15326 602 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 MEP1BQ16820 701 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 GPR139Q6DWJ6 353 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 OR5AS1Q8N127 324 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 ZDHHC22Q8N966 263 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 DEFB108BQ8NET1 73 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 FUZQ9BT04 418 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 PLA2G12AQ9BZM1 189 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 TUBG2Q9NRH3 451 aa20.62■□□□□ 0.89
PTCH1-210ENST00000468211 TMEM89A2RUT3 159 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 TRAPPC2LH3BP13 241 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 TRIM77I1YAP6 450 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 FOXH1O75593 365 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 RHCEP18577 417 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 COMPP49747 757 aaPredicted RBP20.61■□□□□ 0.89
PTCH1-210ENST00000468211 GLYATQ6IB77 296 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 LRRC28Q86X40 367 aaPredicted RBP20.61■□□□□ 0.89
PTCH1-210ENST00000468211 OR52J3Q8NH60 311 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 DVL3Q92997 716 aaPredicted RBP20.61■□□□□ 0.89
PTCH1-210ENST00000468211 PTP4A1Q93096 173 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 OR2V2Q96R30 315 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 SUCNR1Q9BXA5 334 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 PATZ1Q9HBE1 687 aaKnown RBP20.61■□□□□ 0.89
PTCH1-210ENST00000468211 PTTG3PQ9NZH4 202 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 RPS6KA6Q9UK32 745 aa20.61■□□□□ 0.89
PTCH1-210ENST00000468211 FAM32AQ9Y421 112 aaKnown RBP20.61■□□□□ 0.89
PTCH1-210ENST00000468211 DOCK11Q5JSL3 2073 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 UNC119BA6NIH7 251 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 TXNDC12O95881 172 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 TNFSF4P23510 183 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 KCNMB1Q16558 191 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 DPY19L2P2Q6ZN68 376 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.6■□□□□ 0.89
PTCH1-210ENST00000468211 BPIFB2Q8N4F0 458 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 RNF148Q8N7C7 305 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 GCDHQ92947 438 aaPredicted RBP20.6■□□□□ 0.89
PTCH1-210ENST00000468211 DHRS1Q96LJ7 313 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 NDEL1Q9GZM8 345 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 MYLK2Q9H1R3 596 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 DCAF13Q9NV06 445 aaKnown RBP20.6■□□□□ 0.89
PTCH1-210ENST00000468211 IL19Q9UHD0 177 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 PPP1R3CQ9UQK1 317 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 LHFPL6Q9Y693 200 aa20.6■□□□□ 0.89
PTCH1-210ENST00000468211 PPIAL4EA0A075B759 164 aa20.59■□□□□ 0.89
PTCH1-210ENST00000468211 PPIAL4CA0A0B4J2A2 164 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms