RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TDP2O95551 362 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 CSTAP01040 98 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SMIM10L1P0DMW3 83 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 GABRG2P18507 467 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 F2RP25116 425 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 HOXA9P31269 272 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 UBE2AP49459 152 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF133P52736 654 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-209ENST00000467124 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 LCN2P80188 198 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 HMGCS1Q01581 520 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SEMG2Q02383 582 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 TCP10Q12799 353 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 C2orf83Q53S99 150 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 BEX5Q5H9J7 111 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 C6orf183Q5T699 404 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 METTL21CQ5VZV1 264 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 STUMQ69YW2 141 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 CYB5R2Q6BCY4 276 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 CEMP1Q6PRD7 247 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-209ENST00000467124 LYPD2Q6UXB3 125 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 MBOAT2Q6ZWT7 520 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 PEX26Q7Z412 305 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 HDDC2Q7Z4H3 204 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 C6orf120Q7Z4R8 191 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 LINC00523Q86TU6 105 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SLC34A3Q8N130 599 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 TMEM104Q8NE00 496 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 OR5T3Q8NGG3 340 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 OR4S2Q8NH73 311 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 CD300LFQ8TDQ1 290 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 TCP10LQ8TDR4 215 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 RNF138Q8WVD3 245 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SMIM10Q96HG1 83 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SLC35E1Q96K37 410 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 JSRP1Q96MG2 331 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-209ENST00000467124 WFIKKN1Q96NZ8 548 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SLC25A2Q9BXI2 301 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 SPNS1Q9H2V7 528 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 CLSTN2Q9H4D0 955 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 NTN4Q9HB63 628 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 WFDC1Q9HC57 220 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 MTFP1Q9UDX5 166 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 UBIAD1Q9Y5Z9 338 aa2.75□□□□□ -1.97
VPS13A-209ENST00000467124 MAPK8IP3Q9UPT6 1336 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 A0A1W2PRD5 423 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 TRIM49D1C9J1S8 452 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF701M0R085 212 aaPredicted RBP2.74□□□□□ -1.97
VPS13A-209ENST00000467124 HSBP1O75506 76 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 FARS2O95363 451 aaKnown RBP2.74□□□□□ -1.97
VPS13A-209ENST00000467124 PLEKP08567 350 aaPredicted RBP2.74□□□□□ -1.97
VPS13A-209ENST00000467124 STAG3L2P0CL84 134 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 IL32P24001 234 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 PPP1CBP62140 327 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 CACNG7P62955 275 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 XIAPP98170 497 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 GINS1Q14691 196 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 RPEL1Q2QD12 228 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 ARL9Q6T311 187 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 FBXW12Q6X9E4 464 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 ABHD13Q7L211 337 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 MRPL21Q7Z2W9 205 aaKnown RBP2.74□□□□□ -1.97
VPS13A-209ENST00000467124 SH2D6Q7Z4S9 175 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 MKXQ8IYA7 352 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 VKORC1L1Q8N0U8 176 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 KIF2BQ8N4N8 673 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 CBR4Q8N4T8 237 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 ZFP90Q8TF47 636 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 RAB1CQ92928 201 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 CREB3L1Q96BA8 519 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 ZNF799Q96GE5 643 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 BMFQ96LC9 184 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 OPALINQ96PE5 141 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 ASB8Q9H765 288 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 CLN6Q9NWW5 311 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 SLC39A1Q9NY26 324 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 KIF27Q86VH2 1401 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 TNIKQ9UKE5 1360 aa2.74□□□□□ -1.97
VPS13A-209ENST00000467124 LTBP1Q14766 1721 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 WDR62O43379 1518 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 A0A1W2PPV4 95 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 ERICH4A6NGS2 130 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 SYCE1LA8MT33 242 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 PES1O00541 588 aaKnown RBP2.73□□□□□ -1.97
VPS13A-209ENST00000467124 NMT2O60551 498 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 MPDU1O75352 247 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 OTCP00480 354 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 ZDHHC11BP0C7U3 371 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CT45A6P0DMU7 189 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CT45A5P0DMU8 189 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CT45A7P0DMV0 189 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 PRKACAP17612 351 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 RAB3BP20337 219 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 PTNP21246 168 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 MSR1P21757 451 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CPN2P22792 545 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 CFHR2P36980 270 aa2.73□□□□□ -1.97
VPS13A-209ENST00000467124 NUP62P37198 522 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms