RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CECR9P0C854 216 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 CD40P25942 277 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 ATP6V1E1P36543 226 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 RPS27P42677 84 aaKnown RBP13.19□□□□□ -0.3
NPHP4-205ENST00000466897 ZNF83P51522 516 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 IDH3GP51553 393 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-205ENST00000466897 EIF2B1Q14232 305 aaKnown RBP13.19□□□□□ -0.3
NPHP4-205ENST00000466897 RAB39AQ14964 217 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 C6orf141Q5SZD1 244 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 NCMAPQ5T1S8 102 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 OTPQ5XKR4 325 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 SP5Q6BEB4 398 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-205ENST00000466897 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 DEGS2Q6QHC5 323 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 EGFL6Q8IUX8 553 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 SLC35F2Q8IXU6 374 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 CPEB3Q8NE35 698 aaKnown RBP13.19□□□□□ -0.3
NPHP4-205ENST00000466897 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 OR1F12Q8NHA8 337 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 LGALS12Q96DT0 336 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 RADILQ96JH8 1075 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 ATF6BQ99941 703 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 ABHD6Q9BV23 337 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-205ENST00000466897 INPP5EQ9NRR6 644 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 PLEKHB1Q9UF11 243 aaPredicted RBP13.19□□□□□ -0.3
NPHP4-205ENST00000466897 LAMP5Q9UJQ1 280 aa13.19□□□□□ -0.3
NPHP4-205ENST00000466897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-205ENST00000466897 FAM221AA4D161 298 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 EFCAB10A6NFE3 127 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 ZNF670-ZNF695F2Z2N8 137 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 M0R1B8 84 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 SLC1A7O00341 560 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 IGHA1P01876 353 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 COX6B1P14854 86 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 STOMP27105 288 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 LOXP28300 417 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-205ENST00000466897 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-205ENST00000466897 NAAAQ02083 359 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 ROM1Q03395 351 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 EGR3Q06889 387 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 MED21Q13503 144 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 TBC1D28Q2M2D7 210 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 KCTD18Q6PI47 426 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-205ENST00000466897 MYPOPQ86VE0 399 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-205ENST00000466897 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 OR10S1Q8NGN2 331 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 AKR7LQ8NHP1 331 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 SLAMF6Q96DU3 332 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 POM121L2Q96KW2 1035 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 DCLRE1CQ96SD1 692 aaKnown RBP13.18□□□□□ -0.3
NPHP4-205ENST00000466897 MYCBPQ99417 103 aaPredicted RBP13.18□□□□□ -0.3
NPHP4-205ENST00000466897 FKBP14Q9NWM8 211 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 PSORS1C1Q9UIG5 152 aa13.18□□□□□ -0.3
NPHP4-205ENST00000466897 DPRXA6NFQ7 191 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 A6NNC1 897 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 SIAH2O43255 324 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 CRYAAP02489 173 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 CELA3BP08861 270 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 ZNF35P13682 527 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
NPHP4-205ENST00000466897 DCKP27707 260 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 PCSK6P29122 969 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 APLNRP35414 380 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 OPRL1P41146 370 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 HTR5AP47898 357 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
NPHP4-205ENST00000466897 BSPH1Q075Z2 132 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 RBM48Q5RL73 367 aaKnown RBP13.17□□□□□ -0.3
NPHP4-205ENST00000466897 ACBD7Q8N6N7 88 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 PLPPR2Q96GM1 343 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 TMEM204Q9BSN7 226 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 C1QTNF6Q9BXI9 259 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 NIPAL2Q9H841 368 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 AMBNQ9NP70 447 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 COPS3Q9UNS2 423 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 KLHDC2Q9Y2U9 406 aa13.17□□□□□ -0.3
NPHP4-205ENST00000466897 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
NPHP4-205ENST00000466897 LOC100509620A0A075B734 347 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 IGHV2OR16-5A0A0B4J2B6 119 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 A0A1W2PQL4 384 aaPredicted RBP13.16□□□□□ -0.3
NPHP4-205ENST00000466897 J3QW42 95 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 FAM20BO75063 409 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 ZNF254O75437 659 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 DCTDP32321 178 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
NPHP4-205ENST00000466897 C1orf174Q8IYL3 243 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 ZNF679Q8IYX0 411 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 BPIFB6Q8NFQ5 453 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 OR10H4Q8NGA5 316 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 OR52I1Q8NGK6 324 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 GGHQ92820 318 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 C14orf79Q96F83 325 aa13.16□□□□□ -0.3
NPHP4-205ENST00000466897 OR8B4Q96RC9 309 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms