RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 DPM1O60762 260 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 FKBP6O75344 327 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CLDN11O75508 207 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 KRT34O76011 436 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 FARS2O95363 451 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 LSM8O95777 96 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 AIFM1O95831 613 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CD160O95971 181 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 PAHP00439 452 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 HBE1P02100 147 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 ARG1P05089 322 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 IVLP07476 585 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 KRT16P08779 473 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CLTAP09496 248 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 GIPP09681 153 aaPredicted RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CSF3P09919 207 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CCDC172P0C7W6 258 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CHTF8P0CG12 524 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CT45A6P0DMU7 189 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CT45A5P0DMU8 189 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CT45A7P0DMV0 189 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 IGKV1-13P0DP09 117 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 FOLR1P15328 257 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF250P15622 560 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CTRB1P17538 263 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 AK4P27144 223 aaPredicted RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 OR1E1P30953 314 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 BTCP35070 178 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 TNFSF9P41273 254 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CCR8P51685 355 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 PRPS1P60891 318 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 UBE2MP61081 183 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 NUTF2P61970 127 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 SLC25A11Q02978 314 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 DMTNQ08495 405 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 TWF1Q12792 350 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CLINT1Q14677 625 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 GABRA6Q16445 453 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 TRMT5Q32P41 509 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 KRTAP13-2Q52LG2 175 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 LRRC10Q5BKY1 277 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CT45A1Q5HYN5 189 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CASC10Q5T4H9 136 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 GPR107Q5VW38 600 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CTRB2Q6GPI1 263 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 LCN12Q6JVE5 192 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 SLC25A25Q6KCM7 469 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 C6orf89Q6UWU4 347 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 MRPL21Q7Z2W9 205 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 HDDC2Q7Z4H3 204 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM150AQ86TG1 271 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 THOC6Q86W42 341 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 RALGPS2Q86X27 583 aaPredicted RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 MYOCDQ8IZQ8 938 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM58AQ8N1B3 248 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 PNKDQ8N490 385 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 TRAM1L1Q8N609 369 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 TRIML2Q8N7C3 387 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF615Q8N8J6 731 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 SPERTQ8NA61 448 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 OR56A4Q8NGH8 313 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 OR4A15Q8NGL6 344 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 OR8K3Q8NH51 312 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CT45A3Q8NHU0 189 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CD300LFQ8TDQ1 290 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 GEMIN6Q8WXD5 167 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 NDRG1Q92597 394 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 NAT6Q93015 286 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 EEF1AKMT3Q96AZ1 226 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 APH1AQ96BI3 265 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 C9orf72Q96LT7 481 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 SERPINB12Q96P63 405 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 OPALINQ96PE5 141 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CSPG4P5Q96PW8 444 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 P2RX4Q99571 388 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 SH3GL3Q99963 347 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 MICU1Q9BPX6 476 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 OSBPL10Q9BXB5 764 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 MRPL37Q9BZE1 423 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 PLA2G2FQ9BZM2 168 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 ING2Q9H160 280 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 PIGUQ9H490 435 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM38AQ9H6F2 299 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 RPF2Q9H7B2 306 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 UGT1A7Q9HAW7 530 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 UGT1A8Q9HAW9 530 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 ZDHHC4Q9NPG8 344 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 KCNJ16Q9NPI9 418 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 CCL28Q9NRJ3 127 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 AGPAT3Q9NRZ7 376 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 IFNKQ9P0W0 207 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 OPN4Q9UHM6 478 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 YARS2Q9Y2Z4 477 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 KPTNQ9Y664 436 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 PIK3R4Q99570 1358 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 EIF4G1Q04637 1599 aaKnown RBP1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 AKNAQ7Z591 1439 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TRAV6A0A075B6T7 132 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 TRAV39A0A0B4J263 110 aa1.35□□□□□ -2.19
GTF3C3-209ENST00000466862 LOC100506127A0A0U1RQW1 187 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms