RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CCR6P51684 374 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 AQP4P55087 323 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PKIAP61925 76 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 IL9RQ01113 521 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SNTB2Q13425 540 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 RCAN2Q14206 197 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ARL6IP1Q15041 203 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TMED2Q15363 201 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SLC9A3R2Q15599 337 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 CEBPEQ15744 281 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 EXOC3L4Q17RC7 722 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF528Q3MIS6 628 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 C14orf28Q4W4Y0 310 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 Q5BKY6 102 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 OGFRL1Q5TC84 451 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PRAMEF5Q5TYX0 476 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 KHDRBS2Q5VWX1 349 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PRAMEF6Q5VXH4 476 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 NKAIN2Q5VXU1 208 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 WDR25Q64LD2 544 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TIGD3Q6B0B8 471 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 CGB2Q6NT52 195 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 MED27Q6P2C8 311 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ULK3Q6PHR2 472 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 DLEU7Q6UYE1 221 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 MBOAT1Q6ZNC8 495 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 CYS1Q717R9 158 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 LRRC70Q7Z2Q7 622 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PID1Q7Z2X4 250 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ABHD12BQ7Z5M8 362 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 THOC6Q86W42 341 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 C17orf64Q86WR6 236 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ANGPTL5Q86XS5 388 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 RAB43Q86YS6 212 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ZBTB8OSQ8IWT0 167 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TCTE3Q8IZS6 198 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 FAM58AQ8N1B3 248 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PARP8Q8N3A8 854 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 C9orf62Q8N4C0 152 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PQLC3Q8N755 202 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 GVQW1Q8N7I0 195 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 OR4M1Q8NGD0 313 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 OR4K15Q8NH41 348 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TRMT10AQ8TBZ6 339 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 C16orf78Q8WTQ4 265 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 CACNG8Q8WXS5 425 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 RAB1CQ92928 201 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM203Q969S6 136 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ADIPOR1Q96A54 375 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SNRNP40Q96DI7 357 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ZBED6CLQ96FA7 236 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 MED8Q96G25 268 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PRRC1Q96M27 445 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 RNF2Q99496 336 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 KLF6Q99612 283 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 CITED1Q99966 193 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 C7orf50Q9BRJ6 194 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TM6SF2Q9BZW4 377 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PKIBQ9C010 78 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ING2Q9H160 280 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 NXF3Q9H4D5 531 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 KIR3DX1Q9H7L2 352 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF430Q9H8G1 570 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 NANOGQ9H9S0 305 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 GPN2Q9H9Y4 310 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 NMNAT1Q9HAN9 279 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 LPAR2Q9HBW0 351 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ANKHQ9HCJ1 492 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 FBXO8Q9NRD0 319 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ABCB8Q9NUT2 735 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM161AQ9NX61 479 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PSORS1C1Q9UIG5 152 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SCP2D1Q9UJQ7 156 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 OR52A1Q9UKL2 312 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PRG3Q9Y2Y8 225 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 MAB21L2Q9Y586 359 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PEX16Q9Y5Y5 336 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 KNDC1Q76NI1 1749 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TRPM3Q9HCF6 1732 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 PREX1Q8TCU6 1659 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 PREX2Q70Z35 1606 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MADDQ8WXG6 1647 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 ZFYVE9O95405 1425 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TROQ12816 1431 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CNTNAP1P78357 1384 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 USP42Q9H9J4 1324 aaKnown RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 A0A0U1RQS6 177 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 HELTA6NFD8 242 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MGAT4DA6NG13 374 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 OR2AG2A6NM03 316 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 RNF212BA8MTL3 300 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 TSTD3H0UI37 97 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 MKRN2OSH3BPM6 223 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 K7EP13 123 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SLC28A1O00337 649 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 SLC33A1O00400 549 aaPredicted RBP2.79□□□□□ -1.96
VPS13D-203ENST00000466732 BTN3A3O00478 584 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 CHST10O43529 356 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 NME2P1O60361 137 aa2.79□□□□□ -1.96
VPS13D-203ENST00000466732 UPK1BO75841 260 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms