RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ADAM5Q6NVV9 412 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 CFAP77Q6ZQR2 320 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 DCXRQ7Z4W1 244 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 THAP5Q7Z6K1 395 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 OR1F12Q8NHA8 337 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 IPCEF1Q8WWN9 437 aaPredicted RBP13.87□□□□□ -0.19
GPC1-207ENST00000466624 MAP6Q96JE9 813 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 POM121L2Q96KW2 1035 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 ZNF184Q99676 751 aaPredicted RBP13.87□□□□□ -0.19
GPC1-207ENST00000466624 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 PNRC2Q9NPJ4 139 aaKnown RBP13.87□□□□□ -0.19
GPC1-207ENST00000466624 DDX28Q9NUL7 540 aaKnown RBP13.87□□□□□ -0.19
GPC1-207ENST00000466624 TMEM14AQ9Y6G1 99 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 RAI1Q7Z5J4 1906 aaPredicted RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 PHYHO14832 338 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 ICMTO60725 284 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 LYNP07948 512 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 APEX1P27695 318 aaKnown RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 CALCRP30988 508 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 NAA10P41227 235 aaPredicted RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 HTR5AP47898 357 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 GDI2P50395 445 aaKnown RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 NUDT6P53370 316 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 TLE4Q04727 773 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 EIF2B1Q14232 305 aaKnown RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 OR4F15Q8NGB8 312 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 OR10S1Q8NGN2 331 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 HS3ST6Q96QI5 342 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 DCLRE1CQ96SD1 692 aaKnown RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 ATF6BQ99941 703 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 ABHD6Q9BV23 337 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 MRPS18AQ9NVS2 196 aaKnown RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 AASSQ9UDR5 926 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 RPL36Q9Y3U8 105 aaKnown RBP13.86□□□□□ -0.19
GPC1-207ENST00000466624 RTTNQ86VV8 2226 aa13.86□□□□□ -0.19
GPC1-207ENST00000466624 LOC100509620A0A075B734 347 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 SHISA9B4DS77 424 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 ZNF878C9JN71 531 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 MRPL3P09001 348 aaKnown RBP13.85□□□□□ -0.19
GPC1-207ENST00000466624 DBTP11182 482 aaKnown RBP13.85□□□□□ -0.19
GPC1-207ENST00000466624 ALOX5APP20292 161 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 MYF6P23409 242 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 PCSK6P29122 969 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 ZNF91Q05481 1191 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 SPOCK1Q08629 439 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 CDK5R2Q13319 367 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 KRTAP27-1Q3LI81 207 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 ZNF787Q6DD87 383 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 ZNF704Q6ZNC4 412 aaPredicted RBP13.85□□□□□ -0.19
GPC1-207ENST00000466624 SLC35F2Q8IXU6 374 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
GPC1-207ENST00000466624 NUP37Q8NFH4 326 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 OR51G2Q8NGK0 314 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 CNIH3Q8TBE1 160 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 RNF133Q8WVZ7 376 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 SLAMF6Q96DU3 332 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 CDH20Q9HBT6 801 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 LAMP5Q9UJQ1 280 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 EXOGQ9Y2C4 368 aaKnown RBP13.85□□□□□ -0.19
GPC1-207ENST00000466624 PCDHGB1Q9Y5G3 927 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 PLCE1Q9P212 2302 aa13.85□□□□□ -0.19
GPC1-207ENST00000466624 C5orf49A4QMS7 147 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 ATP6V1G2-DDX39BF2Z307 99 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 OR2T7P0C7T2 308 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 OTX1P32242 354 aaPredicted RBP13.84□□□□□ -0.19
GPC1-207ENST00000466624 ATP6V1E1P36543 226 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 RAB40BQ12829 278 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 HIST2H2BCQ6DN03 193 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 KCTD18Q6PI47 426 aaPredicted RBP13.84□□□□□ -0.19
GPC1-207ENST00000466624 SLC22A25Q6T423 547 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 C1orf174Q8IYL3 243 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 KBTBD8Q8NFY9 601 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 OR2T27Q8NH04 317 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 ASB17Q8WXJ9 295 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 CLEC4MQ9H2X3 399 aaPredicted RBP13.84□□□□□ -0.19
GPC1-207ENST00000466624 SPEF1Q9Y4P9 236 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 HECTD1Q9ULT8 2610 aa13.84□□□□□ -0.19
GPC1-207ENST00000466624 IRGMA1A4Y4 181 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 ZNF670-ZNF695F2Z2N8 137 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 J3QRE1 110 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 J3QW42 95 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 NR4A1P22736 598 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 SLC15A1P46059 708 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 RGS6P49758 472 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 CXCR4P61073 352 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 GRB2P62993 217 aaKnown RBP13.83□□□□□ -0.2
GPC1-207ENST00000466624 ACTC1P68032 377 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 ACTA1P68133 377 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 NKX6-1P78426 367 aaPredicted RBP13.83□□□□□ -0.2
GPC1-207ENST00000466624 GALK2Q01415 458 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 ROM1Q03395 351 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 ZNF672Q499Z4 452 aaPredicted RBP13.83□□□□□ -0.2
GPC1-207ENST00000466624 KLHL22Q53GT1 634 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 TMEM154Q6P9G4 183 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 DEGS2Q6QHC5 323 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 ARL9Q6T311 187 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 UNQ6126/PRO20091Q6UXV3 157 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 THEM6Q8WUY1 208 aa13.83□□□□□ -0.2
GPC1-207ENST00000466624 LGALS12Q96DT0 336 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms