RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 COQ7Q99807 217 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 HDHD2Q9H0R4 259 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 VCXQ9H320 206 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 CA10Q9NS85 328 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 ATPIF1Q9UII2 106 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 ST6GALNAC2Q9UJ37 374 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 FBN2P35556 2912 aa12.49□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC22A31A6NKX4 558 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 VSTM5A8MXK1 200 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 SELENOFO60613 162 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 ATP6V1G2O95670 118 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 PCSK6P29122 969 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 APOBEC3AP31941 199 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 THBS4P35443 961 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 NAA10P41227 235 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 SNRPGP62308 76 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 KEAP1Q14145 624 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF544Q6NX49 715 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 DPY19L4Q7Z388 723 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 FBXL14Q8N1E6 418 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 DHRSXQ8N5I4 330 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 NRG4Q8WWG1 115 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC7A6Q92536 515 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF582Q96NG8 517 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 PNRC2Q9NPJ4 139 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 FAIMQ9NVQ4 179 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 DNAJC27Q9NZQ0 273 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 EIF3KQ9UBQ5 218 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 RRP15Q9Y3B9 282 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-208ENST00000466601 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 RAI1Q7Z5J4 1906 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 RAF1P04049 648 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 DANCRP0C864 163 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 FAM157BP0CG42 384 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 CD53P19397 219 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 HTR1FP30939 366 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 TTKP33981 857 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 GLRXP35754 106 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 WNT5AP41221 380 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 RAD52P43351 418 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 UCP2P55851 309 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 ECH1Q13011 328 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 EIF2B1Q14232 305 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 GGTLC2Q14390 218 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC25A30Q5SVS4 291 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 TTC23Q5W5X9 447 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 SLC16A9Q7RTY1 509 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 CDH24Q86UP0 819 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 ENTHD1Q8IYW4 607 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 OR10S1Q8NGN2 331 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 ST7LQ8TDW4 575 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 CYGBQ8WWM9 190 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 C4orf45Q96LM5 186 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 ATF6BQ99941 703 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 APOL4Q9BPW4 351 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 BCL2L14Q9BZR8 327 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 OR51B6Q9H340 312 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 WARS2Q9UGM6 360 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 LAMP3Q9UQV4 416 aa12.47□□□□□ -0.41
DNMT3A-208ENST00000466601 GPRIN2O60269 458 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 MPZL2O60487 215 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 SMPD2O60906 423 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ATE1O95260 518 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ABHD16AO95870 558 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 SOD3P08294 240 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 DBHP09172 617 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 GABRB1P18505 474 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 DNASE1P24855 282 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 RPS23P62266 143 aaKnown RBP12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ADIPOQQ15848 244 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 OCLNQ16625 522 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 RSPO1Q2MKA7 263 aaPredicted RBP12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 AGAP6Q5VW22 663 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 MEDAGQ5VYS4 303 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ARL9Q6T311 187 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 UNQ6126/PRO20091Q6UXV3 157 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 MUC15Q8N387 334 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ZNF454Q8N9F8 522 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 RHOXF1Q8NHV9 184 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 OTOSQ8NHW6 89 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 TMEM171Q8WVE6 324 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 NINJ1Q92982 152 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 RFKQ969G6 155 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 DCLRE1CQ96SD1 692 aaKnown RBP12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 CNN2Q99439 309 aaKnown RBP12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 CCL19Q99731 98 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ABHD6Q9BV23 337 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 YIPF3Q9GZM5 350 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ELOVL3Q9HB03 270 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 CENPMQ9NSP4 180 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 HAO2Q9NYQ3 351 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 AASSQ9UDR5 926 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 GRIP1Q9Y3R0 1128 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 CMAHPQ9Y471 501 aa12.46□□□□□ -0.41
DNMT3A-208ENST00000466601 ROS1P08922 2347 aa12.45□□□□□ -0.42
DNMT3A-208ENST00000466601 ZNF878C9JN71 531 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms