RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 QDPRP09417 244 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 GGNQ86UU5 652 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 DTX1Q86Y01 620 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 UBASH3BQ8TF42 649 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 RNF133Q8WVZ7 376 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 KCNE4Q8WWG9 221 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 YIPF5Q969M3 257 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 UPRTQ96BW1 309 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 CMTM3Q96MX0 182 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 IP6K3Q96PC2 410 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 ZNF385AQ96PM9 386 aaKnown RBP16.2■□□□□ 0.18
COL9A3-205ENST00000466192 NAA11Q9BSU3 229 aaPredicted RBP16.2■□□□□ 0.18
COL9A3-205ENST00000466192 SEC61A2Q9H9S3 476 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 EMC7Q9NPA0 242 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 VAMP5O95183 116 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 GDF1P27539 372 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 AGFG1P52594 562 aaKnown RBP16.2■□□□□ 0.18
COL9A3-205ENST00000466192 CAMK2BQ13554 666 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 POU4F3Q15319 338 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 SLC36A2Q495M3 483 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 ATP1A1-AS1Q5TC04 95 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 LINC00696Q6ZRV3 163 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 OR9K2Q8NGE7 335 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 OR6F1Q8NGZ6 308 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 SYNPRQ8TBG9 265 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 SFXN2Q96NB2 322 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 UTP23Q9BRU9 249 aaKnown RBP16.2■□□□□ 0.18
COL9A3-205ENST00000466192 HES7Q9BYE0 225 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 PLA2G3Q9NZ20 509 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 MRPS18CQ9Y3D5 142 aaKnown RBP16.2■□□□□ 0.18
COL9A3-205ENST00000466192 R4GMQ9 66 aa16.2■□□□□ 0.18
COL9A3-205ENST00000466192 WDPCPO95876 746 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 CASRP41180 1078 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 STARP49675 285 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-205ENST00000466192 OR10S1Q8NGN2 331 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 OR2B2Q9GZK3 357 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 DHDHQ9UQ10 334 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 LHFPL6Q9Y693 200 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 ASPMQ8IZT6 3477 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 TMEM269A0A1B0GVZ9 245 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 ANKRD34BA5PLL1 514 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 A8MV72 311 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-205ENST00000466192 SMAD9O15198 467 aaKnown RBP16.19■□□□□ 0.18
COL9A3-205ENST00000466192 CALCBP10092 127 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 DDOSTP39656 456 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 NKX2-5P52952 324 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-205ENST00000466192 SUCLG1P53597 346 aaKnown RBP16.19■□□□□ 0.18
COL9A3-205ENST00000466192 RAC3P60763 192 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 OR1C1Q15619 314 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 TATDN3Q17R31 274 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 DEGS2Q6QHC5 323 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 TOMM5Q8N4H5 51 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 OR2M7Q8NG81 312 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 CAPSLQ8WWF8 208 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 ASB5Q8WWX0 329 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 SLAMF6Q96DU3 332 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 G6PC2Q9NQR9 355 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 BOKQ9UMX3 212 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-205ENST00000466192 CACNG2Q9Y698 323 aa16.19■□□□□ 0.18
COL9A3-205ENST00000466192 CDRT15L2A8MXV6 281 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 NPIPA2E9PIF3 369 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 NPIPA3F8WFD2 350 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 TLX3O43711 291 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-205ENST00000466192 TMEM127O75204 238 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 H2BFMP0C1H6 154 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 SLC6A1P30531 599 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 PHYHD1Q5SRE7 291 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 ASPHD2Q6ICH7 369 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 BAIAP2L2Q6UXY1 529 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 CFAP77Q6ZQR2 320 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 LINGO2Q7L985 606 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 ZIC4Q8N9L1 334 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 CLEC1AQ8NC01 280 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 THRSPQ92748 146 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 GCDHQ92947 438 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-205ENST00000466192 FER1L6-AS2Q96M78 137 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 OR2M2Q96R28 347 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 FAM173AQ9BQD7 235 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 AUNIPQ9H7T9 357 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 GLTPQ9NZD2 209 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 ABI3Q9P2A4 366 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 OR52A1Q9UKL2 312 aa16.18■□□□□ 0.18
COL9A3-205ENST00000466192 RIF1Q5UIP0 2472 aaKnown RBP16.17■□□□□ 0.18
COL9A3-205ENST00000466192 DNPH1O43598 174 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 RFC3P40938 356 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 UTS2BQ765I0 119 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 LILRB4Q8NHJ6 448 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 MARVELD1Q9BSK0 173 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 MRI1Q9BV20 369 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 TP63Q9H3D4 680 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-205ENST00000466192 C1orf198Q9H425 327 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 TNFRSF10AO00220 468 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 CSNK1A1P48729 337 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 GFRA1P56159 465 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 CLDN15P56746 228 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 CARD18P57730 90 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 RAB25P57735 213 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 TBRG1Q3YBR2 411 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 HACD4Q5VWC8 232 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms